Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01140 ATGGAGGTGACTATTCCAGTGGTTGATCTTGAGAAAATTTCAGACAAAGTGGAGTGCAACAAGCTAAGAGAGGCATGTGAAAAATGGGGTTGTTTCAGGATCATTAACCACTCTATTCCTCCAACTCTCATGGCTGAGATGAAGATGGTGGTTAGAACTCTGCTTGATCTTCCTATGGAGATCAAGAAGCGCAACAAAGATGCAATTGCTGGCAGCGGTTACATGGCACCAAGTGCTGTCAATCCTCTCTATGAAGCCTTAGGCCTCTATGACTTGGGTTCCTCACAAGCTCTGCACAATTTCTGCTCTCAACTTGAAGCAACACCCTATCAGAGGTGTGATCGGTTGATTTTGTTTGTTTCGATATATCCCAGGCAAATAATGGAAGCATATGGCAAAGCAATTCATGATTTGGCAGTGAAAATAGGACAAAAGATGGCTGAATCTCTGGGCATAGTGGGTGCTGATTTCGAGGATTGGCCATGCCAATTTAGAATTAACAAATACAACTTCACCCCAGAAGCTGTAGGGTCCCTTGGAGTTCAGATACACACAGATTCATCGTTCGTAACCATTCTTCAAGATGATGAAAATGTGGGTGGTCTTGAAGTGATGGACAATTCTGGCTCATTTGTGGCCGTTCCTCCATTACCAGGAACACTCCTTGCCAATCTTGGAGACATTGCTCATGTATGGAGCAATGGAAGGTTTTGCAATGTGAAGCACCGTGTGCAATGCAAGGAAGCGACTACACGATTTTCAATTGCTACATTCATGTTAGCACCAAGGAAGGGAAATGTTGAGGCCCCAGCAGAGGTGGTGGACCATGATCATCCACGTCTATACCAACCTTTTATTTATGAAGATTATAGGAAGCTCAGAGTCTCCAACAAAATGCAAACTGGTGAAGTCCTTCAGCTGTTACGCTTGAACTAG 936 0.4402 MEVTIPVVDLEKISDKVECNKLREACEKWGCFRIINHSIPPTLMAEMKMVVRTLLDLPMEIKKRNKDAIAGSGYMAPSAVNPLYEALGLYDLGSSQALHNFCSQLEATPYQRCDRLILFVSIYPRQIMEAYGKAIHDLAVKIGQKMAESLGIVGADFEDWPCQFRINKYNFTPEAVGSLGVQIHTDSSFVTILQDDENVGGLEVMDNSGSFVAVPPLPGTLLANLGDIAHVWSNGRFCNVKHRVQCKEATTRFSIATFMLAPRKGNVEAPAEVVDHDHPRLYQPFIYEDYRKLRVSNKMQTGEVLQLLRLN. 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01140 311 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 160 262 IPR005123 -
Seca10g01140 311 Pfam non-haem dioxygenase in morphine synthesis N-terminal 5 76 IPR026992 -
Seca10g01140 311 FunFam 2-oxoglutarate-dependent dioxygenase DAO 3 307 - -
Seca10g01140 311 Pfam 2OG-Fe(II) oxygenase superfamily 163 259 IPR044861 -
Seca10g01140 311 Gene3D - 1 293 IPR027443 -
Seca10g01140 311 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 294 - -
Seca10g01140 311 SUPERFAMILY Clavaminate synthase-like 4 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01140 Seca-Chr10 10998779 11000941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01140 2 292 Glycosyltransferase AT5G59530 26.645 6.67e-24 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01140 K23947 - gmx:100783059 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01140 10 10998779 11000941 Seca10g01140 10 10998779 11000941 ECH