Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01124 ATGATCATGTCTATCACCCTTAAAAAAGACCATAAAACTATCTGTGACGTAAAGTGCCCAGACCCACCTTTCCAACTACCGCAAGAATTGGTCCTAAACTATGAGATTTCAAAGAAAAAGATTTCTATTCTTTCTGAATTGTCTAAGTTTTCATTGACCCCTGCTCCAGTCTGTTCACGTGACAAGTATGAGTGGGAGAAGTTTTTGAAATTCCTATGCGAAAATGACAAGGTTGGTTTCGTAAAGTTTGAACAGTACAAGTTTTACATTCTGCCTCCGGCTAAAGCCTCTACATCTACCCCTGTCAGTGTTGCGTATCATATAGAGAACAGGTGTACTGTAGATTCTCGTCCAAGGGATTGTGAATCAGTAGATGCTTCCTTTGCATGTTCACACTTAGCCGAACCTGATACTTTTATGTCGAGAGATCCAGCAAATAAGGCAGATTTTTGTGAAGATCGTGCTTGTCATTTTACAGCTGTGAAGCAGGATAGACTCAGCGAGAAAAATTTCATCCGGGCAGACCCAAGTTACCTGAAAACTCTTGGTCAGGTTCACTCTGGATGGATTTTTGGTGGAATAGCTGAGCTTGTTGATAATTCAAGGGATGCCAAAGCCACTAAGATGGATATTTTTGTAGAGATGATACAGCTGAATACATCTGGAAAGGATGTTCCGATGCTGTCAGTTATTGATGATGGTCAAGGGATGAATCACGATGAGGTTGTGAAGATGGTATCTTTTGGGCACAAACAACCTGGTAAAGATGACAATGATCGCATTGGCAGATTTGGTGTTGGATTCAAGACAGGAGCAATGAGGCTTGGAAGAGATGTTCTTGTTCTCACCCAGACTGCGAATTCCAGATCTCTAGCTTTTCTTTCACAATCATTGAATGAAGCCAAAGATAATATTGAGATTCCCATAGTTAGTTACCGTCGACAAGGACAACAGATGGAAATCGACACAAGTGTGCAATCTGAAGCTTTAGCAAAATATAATTTGAAAGCTATTAAGGGATTTTCACCATTTAATAAATATCTTATTGGTGAAAAGGTAGCCTTGTTTGGTGGTCGTACTGGAACACAAATATATATATGGAACCTGGATGAATGGGGATCAGGGTATTGTCTAGAATGGCATGATGGTTTGAGAGGTGGGAGTTCCTTCCATCAAGGTGACATTTTAATTCGCAGTAGAAGGAGTCGTTCTCGTCCAGGGCAAATTAATCAAAAGGTTCGATTGGATTTCTCACTACGGGCTTATTTAGAAGTCATCTTCTTAGTTCCAAGAATGAAGATATATGTTCAAGGGACATTGGTTAAAAGTCGACCACTAGCAAATTTCCTGACTAAAACTGTTATTGAAACTGGTGACATCTTGGGAAGGCCTGCTGAATTGACTCTGGGATTTAGTCAATTAGAATGGGAGCAAGCAAGCTGTGGAATATTTTTGTATTGGCATGGGCGCTTGATTGAGAAGTCATTGGTAGATGTCTGTTTCCAGAGCTCAGAGGTCTGTAATGGTAATTTTGGGGTATAA 1542 0.4034 MIMSITLKKDHKTICDVKCPDPPFQLPQELVLNYEISKKKISILSELSKFSLTPAPVCSRDKYEWEKFLKFLCENDKVGFVKFEQYKFYILPPAKASTSTPVSVAYHIENRCTVDSRPRDCESVDASFACSHLAEPDTFMSRDPANKADFCEDRACHFTAVKQDRLSEKNFIRADPSYLKTLGQVHSGWIFGGIAELVDNSRDAKATKMDIFVEMIQLNTSGKDVPMLSVIDDGQGMNHDEVVKMVSFGHKQPGKDDNDRIGRFGVGFKTGAMRLGRDVLVLTQTANSRSLAFLSQSLNEAKDNIEIPIVSYRRQGQQMEIDTSVQSEALAKYNLKAIKGFSPFNKYLIGEKVALFGGRTGTQIYIWNLDEWGSGYCLEWHDGLRGGSSFHQGDILIRSRRSRSRPGQINQKVRLDFSLRAYLEVIFLVPRMKIYVQGTLVKSRPLANFLTKTVIETGDILGRPAELTLGFSQLEWEQASCGIFLYWHGRLIEKSLVDVCFQSSEVCNGNFGV. 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01124 513 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 163 494 IPR045261 GO:0016887
Seca10g01124 513 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 190 349 IPR036890 -
Seca10g01124 513 Gene3D - 160 348 IPR036890 -
Seca10g01124 513 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 194 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01124 Seca-Chr10 10815854 10834840 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01124 - - ahf:112747625 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01124 10 10815854 10834840 Seca10g01124 10 10815854 10834840 ECH