Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01105 ATGGCGAGCATAAGGCCTTTGCCGGAGGCTGTTCGCAGCTCCGTGCGCTCTGGCATTTTCTTGTTCGACTTGACGCGCGTCGTGGAGGAACTGGTTTTCAATAGCCTCGATGCTTGTGCTACAAAGGTATCAGTGTTTGTTAGTATTGGGAGCTGCTATTTGAAAGTAGTAGATGATGGAGGTGGAATTAGTCGAGATGGACTGGAATTGGTGGGAGAAAGATATGCAACATCAAAATTTCTTACTTTGGCTGACCTGAATGCCATAAGTGGAAACTTTGGTTTTCGTGGGGAAGCTTTAGCTTCCATTTCGGAGATTTCTTTGTTGGAAATTGTGACAAGAACAAATGGAAGGCCAAATGGATATCGAAAAATATTGAAGGTAGGGATAGCTTCCTGTGTTCTATTCTGGAATTAA 417 0.4365 MASIRPLPEAVRSSVRSGIFLFDLTRVVEELVFNSLDACATKVSVFVSIGSCYLKVVDDGGGISRDGLELVGERYATSKFLTLADLNAISGNFGFRGEALASISEISLLEIVTRTNGRPNGYRKILKVGIASCVLFWN. 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01105 138 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 120 - -
Seca10g01105 138 ProSitePatterns DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 IPR014762 -
Seca10g01105 138 PANTHER DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL 1 124 IPR038973 GO:0006298|GO:0016887|GO:0032300|GO:0140664
Seca10g01105 138 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2 129 IPR036890 -
Seca10g01105 138 Gene3D - 2 132 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01105 Seca-Chr10 10639470 10642214 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01105 K08739 - gmx:100788019 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01105 10 10639470 10642214 Seca10g01105 10 10639470 10642214 ECH