Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01071 ATGGCAAACAAGTACCATGTTCGTTCAAATAGTTTTCCTTCTGAATCTCATCCTTGCACTGTTAGAGTAGAGGAGGAGCTGAGCAAGCTCAAGACTTGGGAAGCCACATCCACATCCACATCAAAATCAATTGGCACTGGCTTGTCCTTGCTTGATGATTTGTATACTAGCTTGGAAGATCTTCTCAACCTGCACTCAACCCAAAAGGTGATTTCTCACCATCAAGGTGAGAAATGCATGGAAGAATTGCTGGATGGTTCAGTCAGAATTTTGGATATCTGTGGCATCACAAGGGACATCATGTTACAGATTAAGGAAAATGTCCAAGCCCTTCATTCTGCACTTAGAAGGAGGAAGGGAGATTCAAGCATTGAAAGAAATGTAGCTGAATACTTTTTCTTCTCAAAGAAGATGAAGAAGAATGCAGGGAAGTTGATCACATCTTTGAAGAAAATGGATAGCAAATTTGGAGCATCCCCACTCTTGAATCAAGATCAACAACTCACTGCTTTGGTTAGAGTACTTAGGGAAGTTATTGTTACAAACATGTCTATATTCCAATCCCTTTTATCATTGTTGGCTGTGCCTGCTTCAAAGTCAAAGGCAAATAAATGGTTAATGGTAGCAAAATTAATGCATAAGGGGCTCAATGAAAAAATGGTCCTCATTGAAATTAAAGCTATAGCTCATGAGATTATTTGCTTCCCAGAAAGTACAAAAAACACCAATGAGATTGGAGATCTCAACACTGCTTTGTATTTCCTCCTTGAAAGAGTGAGCAATATGGAAAGAAGTGTGGCTGAATATAATTTCTTCATTAAAAAGATGAAGAAGAATGCTAGAAAGTTGGTCGCATCTTTAAAACAGATGGAAAGTAAATTTGGAGTGTCACCACTCTTGAATCAAGATCAAGACCTTGCTACTTTGTTAAGAGTACTTAGGGAGGTCATCACAATGAACATGTCCATCTTCCAATTCCTTTTGTCTTTCTTGTCCGGGCCAGCTTCAAAGTCAAAGGCTACCAGATGGTTGCTGGTGGCAAAATTGATGCATAAGGGAGTAACATCATGTGAAGAGAACTCACACAGCTTCAATGAATTGCAGTCTGTGGAAGCATCTTTAAGTAGCCTTCTAAGTGAAGGATCTAATGTTGCCAAGATGCAGGTCGCACATGAAAGATTGGAGTCCTTGGAGAATGCCATTGAAAGCTTAGAAAATGGTTTGGAGAGTGTATCCAGGCTCTTGGTGAAAACTAGAGTCTCCCTGTTGAACATAATGACTCAATAG 1287 0.3963 MANKYHVRSNSFPSESHPCTVRVEEELSKLKTWEATSTSTSKSIGTGLSLLDDLYTSLEDLLNLHSTQKVISHHQGEKCMEELLDGSVRILDICGITRDIMLQIKENVQALHSALRRRKGDSSIERNVAEYFFFSKKMKKNAGKLITSLKKMDSKFGASPLLNQDQQLTALVRVLREVIVTNMSIFQSLLSLLAVPASKSKANKWLMVAKLMHKGLNEKMVLIEIKAIAHEIICFPESTKNTNEIGDLNTALYFLLERVSNMERSVAEYNFFIKKMKKNARKLVASLKQMESKFGVSPLLNQDQDLATLLRVLREVITMNMSIFQFLLSFLSGPASKSKATRWLLVAKLMHKGVTSCEENSHSFNELQSVEASLSSLLSEGSNVAKMQVAHERLESLENAIESLENGLESVSRLLVKTRVSLLNIMTQ. 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01071 428 Coils Coil 273 293 - -
Seca10g01071 428 Coils Coil 387 414 - -
Seca10g01071 428 PANTHER OS06G0725500 PROTEIN 2 226 - -
Seca10g01071 428 Pfam Protein BPS1 47 263 IPR004320 GO:0048364|GO:0048367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01071 Seca-Chr10 10265062 10267879 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01071 - - gmx:100775610 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01071 10 10265062 10267879 Seca10g01071 10 10265062 10267879 ECH