Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00906 ATGGCAGAGAAGAGCAAAATCCTAGTCCTTGGTGGCACAGGTTACATTGGAAAATTCATAGTTGAAGCAAGCGCAAAAGCAGGACACCCCACATTTGCCTTGGTCAGGGAGAGCACCGCTTCTAATCCTGAAAAATCAAAGCTTCTTGAGAGCTTCAAGAGCTCTGGAGTCACCCTCCTTTATGGAGATCTAGGTGACCATGAAAGCCTTGTTAAGGCAGTGAAGCAAGTTGATGTTGTAATCTCTACTTTAGGTGGACAACAGATAGATGACCAAGTGAAGCTCATAGCAGCAATAAAAGAAGCAGGAAACATCAAGGTGCATAAATTAAAAAGATTCCTCCCATCTGAATTTGGGCTCGATGTGGACCGTCACCATGCAGTTGAGCCAGTGGCCAGTTTTTATGAGCAAAAGGTGAAAATCAGGAGGGCAATTGAAGCTGCAGGAATTCCTTACACTTACATAAGTTCTAATGCCTTTGCTGGATACTTTATTCCTACATTGGGGCAACAAAATGTTACAGCTCCTCCCAGGGATAAGGTTGTCATTCTTGGAGATGGAAATGTCAAAGGAGTTTATGTTGTGGAGGGAGATATTGGGACTTATACTATCAAAGCAGTGGACGACCCAAGAACCTTGAACAAAACTCTGTATGTGAGACCCCCTGCCAATGTTTTGACCTTCAACGAGTTAGTATCCTTGTGGGAGAACAAGATTAAGAGCACCCTTGAGAAAATTTATGTACCAGAGGAACCACTTCTTAAGAGTATCCAAGAGTCTCCATTCCCTGGCAACTTGATGTTGGCATTAGGCCACTCAATGCTGGTAAAGGGGGATTGTACAAACTTTGAGATTGACCTTTCTTTCGGCGTGGAAGCTTCTGAACTTTATCCTGAGGTCAAATACACAACTATCGACAACTATTTGAATGCATTCGTCTGA 942 0.4321 MAEKSKILVLGGTGYIGKFIVEASAKAGHPTFALVRESTASNPEKSKLLESFKSSGVTLLYGDLGDHESLVKAVKQVDVVISTLGGQQIDDQVKLIAAIKEAGNIKVHKLKRFLPSEFGLDVDRHHAVEPVASFYEQKVKIRRAIEAAGIPYTYISSNAFAGYFIPTLGQQNVTAPPRDKVVILGDGNVKGVYVVEGDIGTYTIKAVDDPRTLNKTLYVRPPANVLTFNELVSLWENKIKSTLEKIYVPEEPLLKSIQESPFPGNLMLALGHSMLVKGDCTNFEIDLSFGVEASELYPEVKYTTIDNYLNAFV. 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00906 313 Gene3D - 6 299 - -
Seca10g00906 313 PANTHER PINORESINOL REDUCTASE-RELATED 3 313 - -
Seca10g00906 313 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 279 IPR036291 -
Seca10g00906 313 Pfam NmrA-like family 7 302 IPR008030 -
Seca10g00906 313 CDD PCBER_SDR_a 6 306 IPR045312 GO:0016491
Seca10g00906 313 Gene3D - 159 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00906 Seca-Chr10 8649335 8652273 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00906 K23050 - gmx:100780246 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g00906 10 8649335 8652273 Seca10g00906 10 8649335 8652273 ECH