Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00900 ATGGTTTCCATGGCATTCTGTGTCAACACCGTGACCTTTCCGAATCCCAACATTCGCCGATTCAACAGATGTCCTGGAATGGCTTTTGCGAGTTTGAGCAACAAAGAAACCACCACTTTGGGAGTGCGACTTACTGAAGGCGAGGGGAATTTGCCGAAACTCGTGCTTTCTTCACCCGCTGGTAGTGAGGCTGAAATTTACCTCTTTGGAGGTTGCATCACTTCTTGGAAAGTTCCTAATGGAAAGGACCTTCTATTCGTTCGCCCTGACGCCGTTTTTAATAAGAAGAAACCAATAAGTGGAGGAGTCCCACATTGTTTTCCACAGTTTGGTCCCGGTCCAATTCAGCAGCATGGGTTTGCACGGAACATGGATTGGACTGTTGTTAATTCTGAAAATGTGGAAGGAAATCCAGTTGTAACCCTTGAACTGAAGGATGCTCCTTATAGTCGTGCTATGTGGGATTTCAGTTTCCATGCTTTATTTAAGATCACCCTAAATACTAAAAGTCTTTCAACGGAGTTAAAAGTTAAAAATACAGACAGTAAGGCATTCTCGTTTAGCACTGCCTTGCACACATATTTTCGAGCTTCTGTAAGTGGAGCATCAGTTAAGGGGTTAAAAGGTTGCAAAACTCTGAACAAAGATCCAGATCCTAAAAATCCAGTGGAGGGTACGGAAGAAAGAGATGTGGTCACTTTCCCTGGATTTGTAGATTGTGTTTATCTTGACGCATCCAATGAGTTGCAACTTGACAATGGCTTGGGTGATATAATATCTATCAAGAACACAAACTGGTCAGATGCTGTGTTGTGGAATCCACATCTTCAAATGGAAGCATGTTACAAAGATTTTGTTTGCGTTGAAAATGCTAAGATTGGAAGTGTCCAGCTAGAGCCCGAACAAACTTGGACAGCTGTGCAGCATCTTAGCATCGCCTGA 942 0.431 MVSMAFCVNTVTFPNPNIRRFNRCPGMAFASLSNKETTTLGVRLTEGEGNLPKLVLSSPAGSEAEIYLFGGCITSWKVPNGKDLLFVRPDAVFNKKKPISGGVPHCFPQFGPGPIQQHGFARNMDWTVVNSENVEGNPVVTLELKDAPYSRAMWDFSFHALFKITLNTKSLSTELKVKNTDSKAFSFSTALHTYFRASVSGASVKGLKGCKTLNKDPDPKNPVEGTEERDVVTFPGFVDCVYLDASNELQLDNGLGDIISIKNTNWSDAVLWNPHLQMEACYKDFVCVENAKIGSVQLEPEQTWTAVQHLSIA. 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00900 313 CDD D-hex-6-P-epi_like 53 311 IPR025532 -
Seca10g00900 313 Pfam Aldose 1-epimerase 53 310 IPR008183 GO:0005975|GO:0016853
Seca10g00900 313 Gene3D - 50 312 IPR014718 GO:0030246
Seca10g00900 313 SUPERFAMILY Galactose mutarotase-like 53 310 IPR011013 GO:0003824|GO:0005975|GO:0030246
Seca10g00900 313 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 48 312 - -
Seca10g00900 313 PIRSF PHexose_mutarotase 33 313 IPR025532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00900 Seca-Chr10 8608362 8611745 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00900 K01792 - gmx:100797902 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g00900 10 8608362 8611745 Seca10g00900 10 8608362 8611745 ECH