Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00879 ATGACGCTGGGTCTGATCAACGCCAACCCTGTCGTTCACGCCAAGAAAGAGAGAATTGCTCGTTCCGAAGATCCTCCCGCCGATGATGCCGTTGATCCCCTCGATATTTATGATTTCGTGAGGGATATTAGGGATCCCGAACATCCTTATTCGTTGGAACAGCTCAGTGTTCTCTCTGAGGAATCAATTACTGTCGATGACAAATTGGGTCGAATTCTGATAACTTTTACGCCAACCGTCCAGCACTGCAGCATGGCCACGGTCATTGGTCTTTGTCTGAGAGTTAAACTAAAGCACTACTTCCCTCCCCATTACAAAGTTTGTTCCCTCTGA 333 0.4745 MTLGLINANPVVHAKKERIARSEDPPADDAVDPLDIYDFVRDIRDPEHPYSLEQLSVLSEESITVDDKLGRILITFTPTVQHCSMATVIGLCLRVKLKHYFPPHYKVCSL. 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00879 110 Gene3D - 27 109 IPR034904 -
Seca10g00879 110 Pfam Iron-sulfur cluster assembly protein 35 99 IPR002744 -
Seca10g00879 110 PANTHER UNCHARACTERIZED 1 107 IPR039796 GO:0106035
Seca10g00879 110 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 35 101 IPR034904 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00879 Seca-Chr10 8419497 8421681 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00879 K26403 - gmx:100500284 199.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g00879 10 8419497 8421681 Seca10g00879 10 8419497 8421681 ECH