Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00577 ATGAGACCGTGCAGCAAGGATGAGGCATTCACTGCCCACCATTCATCCAAGATAATAAAACATATATCAAGACCTCCATCTCTTTGTTCCACTGATATTTGCCCCTACAACACAACACAACACAAAACAGAGAAGAGAAGAGAAACATCCATATTCCTAATGGCACTCAGGATGTGGGCTTCTTCAACTGCCAATGCACTCAAACTCTCTTCTGCTTCCAGGCTTCATCTCTCTCCTCCTTTCTCTCTCTCCAGATGCTTCTCTACTGTGTTGGATGGACTCAAGTATGCAACTTCACATGAATGGGTCAAGCACGAAGGCTCCGTGGCCACCATTGGTATCACTGATCATGCCCAGGACCATCTTGGAGAGGTTGTGTTCGTGGATCTGCCGGAATCCGGTAGCTCAGTTACAAAGGAAAAGGGCTTTGGAGCAGTTGAGAGTGTTAAAGCAACAAGTGATGTAAACTCTCCAATCTCAGGGGAGGTCATTGAGGTTAATGAAAAGCTCAAGGAAACGCCTGGCCTGGTAATTCACTCTAACCTTATCCTAATTTTATAA 561 0.4528 MRPCSKDEAFTAHHSSKIIKHISRPPSLCSTDICPYNTTQHKTEKRRETSIFLMALRMWASSTANALKLSSASRLHLSPPFSLSRCFSTVLDGLKYATSHEWVKHEGSVATIGITDHAQDHLGEVVFVDLPESGSSVTKEKGFGAVESVKATSDVNSPISGEVIEVNEKLKETPGLVIHSNLILIL. 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00577 186 Pfam Glycine cleavage H-protein 94 178 IPR033753 -
Seca10g00577 186 Gene3D - 81 182 - -
Seca10g00577 186 SUPERFAMILY Single hybrid motif 90 180 IPR011053 -
Seca10g00577 186 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 134 163 IPR003016 -
Seca10g00577 186 CDD GCS_H 96 177 IPR033753 -
Seca10g00577 186 ProSiteProfiles Biotinyl/lipoyl domain profile. 109 186 IPR000089 -
Seca10g00577 186 PANTHER GLYCINE CLEAVAGE SYSTEM H PROTEIN 55 180 IPR002930 GO:0005960|GO:0019464
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00577 Seca-Chr10 5228511 5230272 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00577 K02437 - csv:101222346 221.861