Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00566 ATGGGTATGAATCGGCGAGGTGAGTCCATGCCTAGCTCCATAGCAAAAGCTTCAAGCGGTTCGGTGAAACCATTGATAGAAAGAGAACCCCCTCATAATTTGTTTCCCTCGAAGCACGACTTCCCGAGACTCCTCGTCGTGCTTGCAGTTGCATCGCTAGTTGCTTGGACCTGCAACCTCCTCTTTACCAAGTCCCCTACCAAACCCTTTTGCGACTCCAACCTCGACTCTCCTGATTACTTTCCCGGCGGCGATATTTGTGAACCTTGTCCAAGTAACGGAGAATGCAAAGATGGCAAGTTGGAATGTCTTCAGGGTTACCAAAAACATGGGAACTTGTGTATAGAAGATGGAGATATTAACGAATCAGCTCGAAAATTTGTGGATAGAGCAGAACATCACCTCTGTGAAGAATATGCTCAATATTTGTGCTATGGGACTGGGTCAATATGGGTTCATGAGGATGATTTGTGGAATCATTTTGAGCCAATGGGAAATGTCAAAGTGGACAATGCACGATATGATTATACAAAACGAAGAATAGTTGATACAATGGGTAAATTGTTGGAGATGAGGTTGAACTCTCGTGGGATGAAGGAGTTTAAGTGTCCAGATTTGCTGGTAGAGCAGTACAAGCCATATGCCTGTCGCATTCGTCAGTGGATCTCACAGCATATTCTAGTTGTTCTGCCCATTTGTGCCATGCTTGTTGGGTGCACAACTTTGTTCTGGAATGTCCGTCGGAAATTACGCATGTCAAGACGAGTTGAGGAGCTTTACAACAAGGTCTGTGAAATACTTGAAGAGAACGCATTGACATCAAAGAGTGTAAATGGTGAATGTGAACCCTGGGTTGTTGCATCTAGGTTACGGGATCACCTGCTTTTGCCAAGAGAGCGGAAAGACCCTTTATTATGGAAAAAGGTAGTTTTGAAGACATTTTGA 945 0.4423 MGMNRRGESMPSSIAKASSGSVKPLIEREPPHNLFPSKHDFPRLLVVLAVASLVAWTCNLLFTKSPTKPFCDSNLDSPDYFPGGDICEPCPSNGECKDGKLECLQGYQKHGNLCIEDGDINESARKFVDRAEHHLCEEYAQYLCYGTGSIWVHEDDLWNHFEPMGNVKVDNARYDYTKRRIVDTMGKLLEMRLNSRGMKEFKCPDLLVEQYKPYACRIRQWISQHILVVLPICAMLVGCTTLFWNVRRKLRMSRRVEELYNKVCEILEENALTSKSVNGECEPWVVASRLRDHLLLPRERKDPLLWKKVVLKTF. 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00566 314 Gene3D - 241 312 IPR041885 -
Seca10g00566 314 PANTHER INNER NUCLEAR MEMBRANE PROTEIN HEH2-RELATED 22 310 IPR044780 GO:0003682|GO:0005637
Seca10g00566 314 MobiDBLite consensus disorder prediction 1 22 - -
Seca10g00566 314 Pfam Man1-Src1p-C-terminal domain 78 310 IPR018996 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00566 Seca-Chr10 5107028 5112404 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00566 - - aprc:113869566 514.998