Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00551 ATGTCGGCAGCGCAGGTGGATCCGCATGACAAGATGAGGGCCAGGGATGTCAACAAAGTGGCGCGGGGTGAACAAGCTCCAAGGCCTGCTCATGAATACGGCACCGTTTCTCCACCTCCTCCCTCTTCAACTCACAGTATTGATACCAAGAAGATACATGAACAGGGGGAAGAGCCAGGAACAACTCAAATTGGTGCCGCATCACAATCCACCGATTACCAAACACGCCATTGTTATGTAAAATATGTGGAGTATCACAGATGTCTTCAGCAGAAGAGCGAAAAGGCACCCGAATGCGAGAGACTTGTCACGTATGTTAGGTCCTCGTGTCCATCCAAATGGATTGCAGAATGGGATAAAGAGAGAGCAGAGGGGAGATTTCCTGGTGATATATAG 396 0.4924 MSAAQVDPHDKMRARDVNKVARGEQAPRPAHEYGTVSPPPPSSTHSIDTKKIHEQGEEPGTTQIGAASQSTDYQTRHCYVKYVEYHRCLQQKSEKAPECERLVTYVRSSCPSKWIAEWDKERAEGRFPGDI. 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00551 131 Gene3D Cytochrome c oxidase, subunit VIb 41 131 IPR036549 GO:0005739|GO:0045277
Seca10g00551 131 MobiDBLite consensus disorder prediction 8 26 - -
Seca10g00551 131 PANTHER CYTOCHROME C OXIDASE SUBUNIT 6B 55 130 IPR003213 GO:0005739
Seca10g00551 131 Pfam Cytochrome oxidase c subunit VIb 72 123 IPR003213 GO:0005739
Seca10g00551 131 MobiDBLite consensus disorder prediction 1 71 - -
Seca10g00551 131 ProSiteProfiles Coiled coil-helix-coiled coil-helix (CHCH) domain profile. 75 118 - -
Seca10g00551 131 SUPERFAMILY Cytochrome c oxidase subunit h 73 131 IPR036549 GO:0005739|GO:0045277
Seca10g00551 131 CDD Cyt_c_Oxidase_VIb 74 130 IPR003213 GO:0005739
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00551 Seca-Chr10 5009362 5011390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00551 K02267 - gmx:102665439 189.504