Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00448 ATGGCAATCAGATTCATTATGTCCACCGCAACCCCGCTACTCACAAAGCGCCACGTCGCAGTGATCGGCGCCGGCGCCGCCGGTCTAGTTGCGGCACGCGAGCTCCGACGAGAAGGGCATGGCGTGGTGGTTTTCGAGCGAGGGGACCAAGTGGGTGGCACGTGGGTGTACACTGCCGAGGTGGAATCGGACCCGCTTGGTTTGGACCCGAGGAGGAGGTTGGTCCACTCGAGCCTGTACGAGTCGCTCCGAACCAACCTGCCTCGGGAGACCATGGGGTTCCTGGATTATCCGTTCAGGAGGAAGGAGGAGAAGGGGAGGGACCCGAGAAGGTTTCCAAGTCACAGAGAGGTGTTGATGTACTTGCAGGATTTCGTTGCTGATTTTGAAATCGATGAATTGGTGAGGCTTCAGACGGAGGTGGTGCTTGCTGTTGCTGGGTTGGGTGAGGGTGGAAAATGGAGGGTCATATCAAGATCACCCGATAGTGATTGTGTGGATGAGATTTATGACGCCGTAGTCGTTTGCAATGGACATTACGTTCAGCCTCGACTCGCTCATAATATCCCTGGCATTAATGCATGGCCAGGGAAGCAGATGCATAGCCATAATTATAGGATACCTGAGCCTTTTCAAGATCAAGTTGTAGTTTTAATAGGTAGTGCTGCTAGTGCGGTTGATATCTCTCGAGACATTGCAACAGTTGCTAAAGCAGTCCACATTGCAGCTAGGTCAGCTGAAGAAGCTAAGCTTGGAAAGGTGCCCGGCCATGATAACATGTGGCTTCATTCTATGGTAAAACCTATCATCTATGGTGAGAATTGGATGGCTATATATATCCATAAATTTGTTTGA 855 0.5123 MAIRFIMSTATPLLTKRHVAVIGAGAAGLVAARELRREGHGVVVFERGDQVGGTWVYTAEVESDPLGLDPRRRLVHSSLYESLRTNLPRETMGFLDYPFRRKEEKGRDPRRFPSHREVLMYLQDFVADFEIDELVRLQTEVVLAVAGLGEGGKWRVISRSPDSDCVDEIYDAVVVCNGHYVQPRLAHNIPGINAWPGKQMHSHNYRIPEPFQDQVVVLIGSAASAVDISRDIATVAKAVHIAARSAEEAKLGKVPGHDNMWLHSMVKPIIYGENWMAIYIHKFV. 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00448 284 Gene3D - 15 216 IPR036188 -
Seca10g00448 284 Pfam Flavin-binding monooxygenase-like 17 245 IPR020946 GO:0004499|GO:0050660|GO:0050661
Seca10g00448 284 SUPERFAMILY FAD/NAD(P)-binding domain 15 248 IPR036188 -
Seca10g00448 284 PRINTS Flavin-containing monooxygenase (FMO) signature 170 186 IPR000960 GO:0050660|GO:0050661
Seca10g00448 284 PRINTS Flavin-containing monooxygenase (FMO) signature 200 214 IPR000960 GO:0050660|GO:0050661
Seca10g00448 284 PRINTS Flavin-containing monooxygenase (FMO) signature 17 33 IPR000960 GO:0050660|GO:0050661
Seca10g00448 284 PRINTS Flavin-containing monooxygenase (FMO) signature 227 242 IPR000960 GO:0050660|GO:0050661
Seca10g00448 284 PIRSF FMO 15 249 IPR000960 GO:0050660|GO:0050661
Seca10g00448 284 PANTHER DIMETHYLANILINE MONOOXYGENASE 17 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00448 Seca-Chr10 3893955 3896938 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00448 - - lja:Lj2g3v2002280.1 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g00448 10 3893955 3896938 Seca10g00448 10 3893955 3896938 ECH