Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00400 ATGAACTTTCTTGAGAATTATTTGCATATTTTGCAGAATTCAAGTTGCGTAATCCTTATATTCAGTGTCAACATGAGTGGTTCCTTCCAAGGGTATGCACAAATGGCGTCCTCCATTGGGTGGAGGAGAGACAATGTTTGGAGTGAGGGGGGTGGTAAAAGTAATCCTTGGGGTCGCAGTTTTAAGGTCAAATGGTTACGCTTGAATGACTTGCCTTTCCATAAGACTCTTCATCTGAAGAATCCATTGAATGAATATAAACCTGTCAAAATTAGCAGAGATTGCCAGGAGTTATCTCCAGATATTGGTCTAGCTCTTTGTGAACTCCTTGATGGTAAGAATGACGTGGATCACCTGATGATAAGTTCGTCAAGGGATAATATTTCTTTGAAGGGTCAATCTGTGAACACTCCAAGTTCAATGGGAGATGATGACTGTGACTCACCCTCACTGCATTTGTCATGGTCAATGCCCCTGCCTTATTCTTCCTTGTTTTACCAAAATCAAGCTGAAGTAAATAAATTTCATTCAACAAACCAGAGATTCAGTGGGACAATAATGTCCACTGGAATATCACCTATTACTTCCGAGTCATCAAAAGTAGCAGGGATTAAACGCTCTCATTTTAGTGAGCATATTCCAAAGCTAGCAGTAGACAAAGATGTGGCTTCTCAATTTGACGTTTGGGGTCTGTCTTCAGAAAGCCATTTAGCTAGTACCCTAACTGAGGATGATTTTCTTGACATGGTATTGGGATATTATCTTTCCTCCACTAATCAATTATTTTGTTTTTGCCCCCTTTTATTTCATGTTGTTGTTTAG 822 0.3954 MNFLENYLHILQNSSCVILIFSVNMSGSFQGYAQMASSIGWRRDNVWSEGGGKSNPWGRSFKVKWLRLNDLPFHKTLHLKNPLNEYKPVKISRDCQELSPDIGLALCELLDGKNDVDHLMISSSRDNISLKGQSVNTPSSMGDDDCDSPSLHLSWSMPLPYSSLFYQNQAEVNKFHSTNQRFSGTIMSTGISPITSESSKVAGIKRSHFSEHIPKLAVDKDVASQFDVWGLSSESHLASTLTEDDFLDMVLGYYLSSTNQLFCFCPLLFHVVV. 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00400 273 CDD YTH 17 110 IPR007275 GO:0003723
Seca10g00400 273 ProSiteProfiles YTH domain profile. 1 110 IPR007275 GO:0003723
Seca10g00400 273 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 14 114 IPR045168 -
Seca10g00400 273 Gene3D ph1033 like domains 2 121 - -
Seca10g00400 273 Pfam YT521-B-like domain 11 110 IPR007275 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00400 Seca-Chr10 3498879 3499871 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00400 K20100 - gmx:100784130 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g00400 10 3498879 3499871 Seca10g00400 10 3498879 3499871 ECH