Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00393 ATGGCGTCGTCTCCTCCCCCTAGGGATCAGGGTCAAGATCAAGATCAGCATCAACATCAGGAACAGGAAAACCAACACCAAAACCTGCCCGCAGTGAAAGACTGCATCCACAAAACCAAAACGATTCAGTTTCTTGGACGCACCACTCCGATCATTCTCCAAAACGACAATGGCCCCTGCCCCCTCCTCGCTATCTGTAATGTTCTTCTGCTAAGAAACAACCTAAATTTGAGTCCAGATATTGCTGAAGTCTCACAGGAGAAATTGCTTTCATTGGTTGCTGAACGATTGATTGATTCAAACAGTAATGTGAATAACAAAGATGCAGGCTATGTCGAAAATCAACAACAGAACATTGCCGATGCAATTGATTTGCTCCCCAGGCTTGCTACTGGCATTGATGTAAATATAAAGTTTATGAGAATAGATGATTTTGAATTCACTAGAGAGTGTGCCATATTTGATCTGCTGGACATCCCTCTGTATCATGGCTGGATAGTTGATCCTCAGGATTATGATACTGCAAATGCAATTGGATCAAAGTCCTATAATGCCCTTATGGGAGAGCTTGTTTCTCTTGAAACACGAAACATTGAAATCCAACCTAAAAATAATCTGGAAGAAGATTGTGTTGATTTTGTGGCTGCAACAACTGCTGCTCTTGGGGTTCCTTCTCCTAATCTTTCAAAAACCAGGTCCTTTGATGATTCTCCACATTCTGCTTCTGATCAGATACCAAGAAAAGGTGATATTCAAGAAGAGGCAGAGTTGTTGAGAGTCTTGAAGCTGTCTGAGGTTGATTCTAAAGCTTCAGTAAGTTATCCTGTTGTAGATCATATAAATGGAACTGGAGAAGCAATGTCCGTCAGTATGGATGAAAACATGTGTAACAAACAGGCTATAACTGTGGGTTCTGGAGATGAGTTAGGAAAGAGCACCGGTGCTGGAAACAATGACTTTCATGAGCCAGAACCTTCCATATCTAATGATTGCACTGCTTCTAGCAAAGACATCAATGAACATACATCATCTCCATCTACACTGGCAGAAGCAGCTAATTCATCCTTAAAGACTGATGCTGTAAGCGGCTTTCATCAATCAGCTTATATGGGACCTGAAGAATCTATTTTACAGAATGACATGGTTGAGAAGAATAGCCTTGATGGATTGGTTCATAATGAGAGTGCAGCTATCCTTGATCCTGAAAAATACTCTGCCTCTTTGATTGAGAGCTGTGCAGATGTCACTGGAGGGGGTGGAGAAGTTCACGAGCAATCCTCTCTTACAACTATAGATCATGGAGTTGCAGATGAATCTCAAGTTCTTGATGCAACAGGATTATCATCCATATCCGCAAGCCATACAAATTCAGATTCATCTAGTGTCAGATTTCATCAAACAGAAGCTTCTGGAGCATTGCCTTCAACTGTTGATGGGAGTGAGCCCATATATGAAGGAGAGGAATGTGTATTGGATACAAGAACTGGAAATTTTGTGGATCGTGAACCTGTTTATGAAGGTGAGATGGTGCTTGCAGAACAGGCTGACAAAAGCACTTTAGTTTCCCCCGATCTAAGTGCTAAGGATGAAATGACTCCACAACAAGGGGAATTGATCAAGAGTTTCTTGAGGAATAATGCCAGCCAGTTGACATTTTATGGGTATGTATGTTGA 1674 0.4158 MASSPPPRDQGQDQDQHQHQEQENQHQNLPAVKDCIHKTKTIQFLGRTTPIILQNDNGPCPLLAICNVLLLRNNLNLSPDIAEVSQEKLLSLVAERLIDSNSNVNNKDAGYVENQQQNIADAIDLLPRLATGIDVNIKFMRIDDFEFTRECAIFDLLDIPLYHGWIVDPQDYDTANAIGSKSYNALMGELVSLETRNIEIQPKNNLEEDCVDFVAATTAALGVPSPNLSKTRSFDDSPHSASDQIPRKGDIQEEAELLRVLKLSEVDSKASVSYPVVDHINGTGEAMSVSMDENMCNKQAITVGSGDELGKSTGAGNNDFHEPEPSISNDCTASSKDINEHTSSPSTLAEAANSSLKTDAVSGFHQSAYMGPEESILQNDMVEKNSLDGLVHNESAAILDPEKYSASLIESCADVTGGGGEVHEQSSLTTIDHGVADESQVLDATGLSSISASHTNSDSSSVRFHQTEASGALPSTVDGSEPIYEGEECVLDTRTGNFVDREPVYEGEMVLAEQADKSTLVSPDLSAKDEMTPQQGELIKSFLRNNASQLTFYGYVC. 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00393 557 MobiDBLite consensus disorder prediction 307 326 - -
Seca10g00393 557 MobiDBLite consensus disorder prediction 1 31 - -
Seca10g00393 557 PANTHER NF-E2 INDUCIBLE PROTEIN 16 557 IPR007518 GO:0004843|GO:1990380
Seca10g00393 557 MobiDBLite consensus disorder prediction 227 246 - -
Seca10g00393 557 Pfam MINDY deubiquitinase 66 190 IPR033979 GO:0004843|GO:1990380
Seca10g00393 557 MobiDBLite consensus disorder prediction 333 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00393 Seca-Chr10 3449676 3457083 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00393 K01309 - gmx:100808340 799.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g00393 10 3449676 3457083 Seca10g00393 10 3449676 3457083 ECH