Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00383 ATGGAAGGATCTCTCTTTGATGTCCATAGGGCTGAACCATCCCAACAACCACCATTGGATATGAAACGGGCAGAGTCATCACAGCAGCATGTGAGAGCTTTAAATACCCAGTTTGCAAGCTGGGTCCAAACACAACTGAAGAATCATCCTGATGAGCTCTGGGAAGATGGTGTCAGAGATTACTTAGATCACGCTTCAAGTATTATGGAAAAATTTAGTGATGTTGTCTGTTGGCTCAAAGCAAATGCCACCAAGGCAGAAATTTTGGCTCCTGATTCTGGCGCTGCTTTTGCTGGGAAAAAATTATTGCCTGAAGTAACAAACAAAGAAAGTAAAACTTTTGGAGAAAAAACTGGGTCTACTCCTGTTAGTACTGCTACAAATTTTGCTAGCTCGTGGAGCCCTGGAATATTTTCAAACACTCAAACAAACAGTCAAACCCTTTTTTCATTTGGAAATCAAAGTTCAGCTCCCTCTAATCATGGTGCTTCAGATGATGTAGATGGTGAAAATGACTTGGAGCAGCCTAGCAGCCCATCAGTGAAGAAATCAGAAGAGAAAGGTGTGGTAGTTGTGCATGAAGTGAAATGTAAGCTTTATGTGAAGTCAACTGATCCAGCAGATAAAGATGTATGGAAAGATAAAGGAATGGGCCAACTCTCTATTAAATGCAAAGAGGGTGTGAGCAAGGCTACCAAAGAGTCCAAACCTACAATTGTGGTTCGAAATGAGGTTGGAAAAATTCTTCTCAATGCCTTGTTGTATCCAGGAATCAAGACAAATCTACAGAAGAACTCCGTTGTTGCAATATTCCATACTTCGGGTAATGCTGATGGAAGCGGGGGAGATAACGATAGTGTTGTTGCACGTACATTTTTGATCCGAATGAAAACAGAAGATGATCGAAATAAACTGGCTTCGACTATTCAAGAATATGCTCCAGAATCTTGA 951 0.4101 MEGSLFDVHRAEPSQQPPLDMKRAESSQQHVRALNTQFASWVQTQLKNHPDELWEDGVRDYLDHASSIMEKFSDVVCWLKANATKAEILAPDSGAAFAGKKLLPEVTNKESKTFGEKTGSTPVSTATNFASSWSPGIFSNTQTNSQTLFSFGNQSSAPSNHGASDDVDGENDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDVWKDKGMGQLSIKCKEGVSKATKESKPTIVVRNEVGKILLNALLYPGIKTNLQKNSVVAIFHTSGNADGSGGDNDSVVARTFLIRMKTEDDRNKLASTIQEYAPES. 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00383 316 MobiDBLite consensus disorder prediction 148 162 - -
Seca10g00383 316 SUPERFAMILY PH domain-like 183 313 - -
Seca10g00383 316 PANTHER RAN BINDING PROTEIN 20 313 IPR045255 -
Seca10g00383 316 SMART ranbd_3 173 312 IPR000156 GO:0046907
Seca10g00383 316 Pfam RanBP1 domain 181 311 IPR000156 GO:0046907
Seca10g00383 316 MobiDBLite consensus disorder prediction 148 186 - -
Seca10g00383 316 FunFam AT4g11790/T5C23_220 80 315 - -
Seca10g00383 316 Gene3D - 105 315 IPR011993 -
Seca10g00383 316 CDD RanBD_NUP50 185 313 - -
Seca10g00383 316 ProSiteProfiles Ran binding domain type 1 profile. 183 316 IPR000156 GO:0046907
Seca10g00383 316 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00383 Seca-Chr10 3351138 3357779 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00383 K14295 - gmx:100816975 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g00383 10 3351138 3357779 Seca10g00383 10 3351138 3357779 ECH