Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00297 ATGCTCATTCACCACTTGTCATTTCATTTGTTTAGTCATTTTGATAAACATTCAAGAGGCTCTGAAGCCTTGTACTTATTATTGTGGAGAATGAATGAGAAAATGGAAAGCATTCAAATTAACATTCCTACAAGTACAACTACTAAACCCGAGCTGCCTGAAATTGGCACAAAATCTGGAGCCAGCAGCTGCACTATCTCGTGTAAAGCTTGGCTTCAGATTCAGAGTGTATGGGACTTTTGCAAGGAAGATAGCAGCAGAGTAATATTTCCACTAAAAGTTGGACTAGCTGTTCTTTTAGTGACTCTACTCATACTATTTCAAGCCCCATACCAAGTCTTTGGAATTGGACCCAATATCGTATGGGCCATTCTCACTGCTGTCCTCGTCTTCGAATACACTGTTGGAGAAACATTCAATCGAGGATTTAATCGAGCACTGGGAAGCTTGCTGGCGGGAATCTTGGCCATTGTTGTTGCTCAGACAGCGCTTTGCAGTGGTCATGTTGCTGAACCTATTATTATTGGTCTTAGTATATTCTTGATCGCGGTTGTTACGTCATTCATGAAAATGTGGCCATCGCTGGTGCAGTATGAGTACGGGTTCAGGGTCATATTGCTAACCTACTGTTTGATCATAGTGTCTGGCTATAGAATGGGTAACCCAATTAGAACTATGATCGATCGATTTTATACAATCGCCATTGGAGGAATAATATCAGTTTTGGTGAATGTCTCTGTTTTTCCTATATGGGCTGGGGAGCAACTACACAAAGAGCTGGTTACAAACTTCGAATCACTGGCAGATTCACTTGAGGAATGTGTTAAGAAATATTTAGAGGAGGGATCAGAAAAGTCTAAGTTCACCTCAGCTAGTGTAGATGACTTTGCAGACGAACTAGCTTATAACAAGTGTCAAAGCGCCTTAAATTCAGGGCCAAAGCTTGAGACTCTGGCTAATTCAGCAAAATGGGAGCCACCACATGGTAGATTCCTGCAGTTCTTGTATCCATGGTCACAATATGTTGAAGTAGGGGCAGTGTTGCGACACTGTGCTTATGAAGTTATGGCACTCCATAGTATAGTTCACTCAGAAATTCAGGCACCCTACAACCTGCGGGTTGCGTTCCGGTCAGAAATCCAAGAGGCATCAAAACAGGCTGCAGAGCTAGTAAGGATTCTGGGAAGAGACATTAGCAGCATGAAGTGGAGTCTGAAAAACTCTCATATTAAGTGTGTTCACAGCTCTACCGAGAGGCTGCAACGTTCTATGCACCTCCATTCTTATCTACTCACAGCCACTTTTGAATCCCCCGTGCCTGCAGATATTAACCCTTCCAAGCCCCTTTTGAATCTCTCTCATACCCTGACATCATCCACCCTTTACCACTTACCAGATCAAACGGGAACGGTTGAGCTTAAGTACCCAAAAAAGAACTCAAACCCACTAGCTCAAAACATTCCAATAGAACAAGCAATAAAGAAGCAGTTGAGAAGGCAACATTCTTGGCCATCCAGAGATCAAGTGGGTGCCTTTGAAGAAGAGGACTACTTGTTACCTAGGATGAGAACTTTAGAGAGTACTGCAGCCTTGTCACTGGCCAACTTCACTTCCTCGCTCATAGAGTTTGTGGCCAGAGTTGACCACTTGATAGAGGCAGTTGATAAGCTTTCCAAGATGGCTAAGTTCAAGCCTGACGAGTACATTGTAGAACGAAATTAA 1722 0.4303 MLIHHLSFHLFSHFDKHSRGSEALYLLLWRMNEKMESIQINIPTSTTTKPELPEIGTKSGASSCTISCKAWLQIQSVWDFCKEDSSRVIFPLKVGLAVLLVTLLILFQAPYQVFGIGPNIVWAILTAVLVFEYTVGETFNRGFNRALGSLLAGILAIVVAQTALCSGHVAEPIIIGLSIFLIAVVTSFMKMWPSLVQYEYGFRVILLTYCLIIVSGYRMGNPIRTMIDRFYTIAIGGIISVLVNVSVFPIWAGEQLHKELVTNFESLADSLEECVKKYLEEGSEKSKFTSASVDDFADELAYNKCQSALNSGPKLETLANSAKWEPPHGRFLQFLYPWSQYVEVGAVLRHCAYEVMALHSIVHSEIQAPYNLRVAFRSEIQEASKQAAELVRILGRDISSMKWSLKNSHIKCVHSSTERLQRSMHLHSYLLTATFESPVPADINPSKPLLNLSHTLTSSTLYHLPDQTGTVELKYPKKNSNPLAQNIPIEQAIKKQLRRQHSWPSRDQVGAFEEEDYLLPRMRTLESTAALSLANFTSSLIEFVARVDHLIEAVDKLSKMAKFKPDEYIVERN. 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00297 573 Pfam Aluminium activated malate transporter 78 558 IPR020966 GO:0015743
Seca10g00297 573 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 71 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00297 Seca-Chr10 2581103 2584297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00297 75 570 Miscellaneous Gene Families AT3G18440 37.911 3.75e-101 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00297 K25841 - gmx:102668657 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g00297 10 2581103 2584297 Seca10g00297 10 2581103 2584297 ECH