Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00290 ATGCGTAGCCGGGGATCGCAAAGCCGGCTATCTGGTCAATCTTTTGGATCTCGAGTTTCCGCTCTCATGTTTGCTATGATTGCTACAATGGCTACTATTTATGTTGCCGGCCGGCTATGGCAGGACGCGGAGAGTAGGGTATATTTAATTGAAGAGCTTGAAAAAAGAGCTGTATGGTTCATCCGATTTCAGGGTCAATCTGCCATATCTGTTGATGATACACTGAAAATTATAACCTGCAGGGAACAACAAAAGAAGTTGTCTGCCCTTGAGATGGAACTAGCTGCAGCTAAACAGGAAGGTTTTGTTCCAAAGCATTTGTCAGGAAATGATGAGAAGCATCCTACAAAGAAGACACTTTCAGTTATAGGAATAATGACAACCTTTGGCCGACAAAAGAACCGAGATGCAATCCGTAAGGCATGGATGCCAACAGGTACAACTATGAAAAAACTGGCAGATCAAAAAGGCATCATTGTGCGATTTGTAATAGGAAGAAGTGCAAATCGTGGAGACAGTTTGGACAAAGAAATTGAAACAGAAAGCAGTCAGACCAATGACTTCATCGTTCTTGATAATCAAGTGGAGGCACCTGAAGAGAGAGCAAAAAAGATAAAATCATTCTTCATTCATGCAGTGGACAACTGGGATGCTGAATTTTATGCTAAGGTCAATGATGATGTCTATGTTAATCTTGATGCTCTTGGAGGGCTGCTAACTTCTCATTTGGACAAGCCTCGTGTTTATATTGGTTGTATGAAATCAGGCGAAGTTTTCTCTGAGCCGACTAACAAATGGTATGAGCCAGACTGGTGGAAATTTGGCGATGGAAAATCATACTTTCGACACGCTTCAGGCGATGTCTATGTCATTTCAAAAGCATTGGCTCAGTTTATTTCAATAAACAGATTTATTCTTTGTACATATGCACATGATGATATAAGCACTGGATCATGGTTTATTGGCCTTGATGTAATGCACGTTGATGAAAGGAAGTTTTGCTGCTCCTCCTGGTCCACAGGTCTCTTTCTTTCTACCCCCTCTCTCTCACACACACACGCTTGCAATTTATATGGTTAG 1080 0.4157 MRSRGSQSRLSGQSFGSRVSALMFAMIATMATIYVAGRLWQDAESRVYLIEELEKRAVWFIRFQGQSAISVDDTLKIITCREQQKKLSALEMELAAAKQEGFVPKHLSGNDEKHPTKKTLSVIGIMTTFGRQKNRDAIRKAWMPTGTTMKKLADQKGIIVRFVIGRSANRGDSLDKEIETESSQTNDFIVLDNQVEAPEERAKKIKSFFIHAVDNWDAEFYAKVNDDVYVNLDALGGLLTSHLDKPRVYIGCMKSGEVFSEPTNKWYEPDWWKFGDGKSYFRHASGDVYVISKALAQFISINRFILCTYAHDDISTGSWFIGLDVMHVDERKFCCSSWSTGLFLSTPSLSHTHACNLYG. 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00290 359 Coils Coil 80 100 - -
Seca10g00290 359 Gene3D - 109 343 - -
Seca10g00290 359 FunFam Hexosyltransferase 110 339 - -
Seca10g00290 359 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 84 328 IPR002659 GO:0006486|GO:0016020|GO:0016758
Seca10g00290 359 Pfam Domain of unknown function (DUF4094) 17 99 IPR025298 -
Seca10g00290 359 Pfam Galactosyltransferase 134 329 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00290 Seca-Chr10 2513157 2517952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00290 22 342 Glycosyltransferase AT5G53340 64.486 1.32e-160 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00290 K20854 - gmx:100802753 574.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g00290 10 2513157 2517952 Seca10g00290 10 2513157 2517952 ECH