Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00249 ATGAAGAAGAATCAACCTCGACATCGATCCCATGTCAGATGCAAATGTCAAGGGGACCATGCAATAGCGGAAATTTTTGGCCTCTCCTTCTCCTTCCTTTTTTCTCTATGGTGCCTCCTTTCCATCTTCTACTCCAAGCTTCGCCTTGTTCATGGCACTGGAGGAGCTGTGTTAGAGTTTAATGAATCAGCTAATTCCACCAGTCTCGGAGGCCTTAGTGAGAAACTTGCAAAACCCACATACTCACTTGTTGAAATAACTAGTTTACAACAAGTATTTTGGCAAGCTTTAGGTAATAATAATAATAGTACTAGTAATTTAGTGTGCAAGCTACAACCTAGTCAAGAGGAAAAGAAACTTCAAGCACCTCAACTTCCTGGTGAGAATGTTCATCCAGCTTCTCACCGGAACATAGCACCACAAGAACAAGACAGGGGTGTGAACTCTGAGCTTGTTAACAACATTACCCACCGGCTTGAATCTGATGGTTCAGTGTACAACTATGCCTCTGAGTCCAAAGGTTCAAAGGTGGTGGCCCATAATAAGGAGGCCAAAGGTGCAAAGAATATACTTGGGAAGGATCATGACAAGTACCTGAGGAACCCTTGTTCAGTTGGAGGAAAGTTTGTTGTTATTGAGCTTTCAGAAGAGACTCTGGTTGATTCTGTGAAAATTGCAAACTTTGAGCATTATTCTTCTAACTTCAAGGAATTTGAATTGGCTGGTAGTTTGAGCTATCCTACTGAATCATGGAGCATGCTGGGGAACTTTATTGCTGCCAATGCCAAGCATGCACAGATCTTTAAGCTGCCTGAACCCAAATGGGCCAGGTACTTAAAGTTGAGCTTGCTCAGTCATTATGGATCTGAGTTTTACTGCACATTGAGTGTTGTAGAAGTTTATGGGATCAATGCAATAGAGCGGATGCTTAAGGATCTAATAGTTGCTTCTGTGGGATCCGTTCCTGACAAGTCACCAGCACATAATATCAGTGACACCCCTTCTTTGAAGTCAGAAGCTGGTCAAATTGACAGAAATGGAAAAGAAGTGGAAAGTGAGAATGATACTGTGGCTGCTGAGATATCAAGCAATGATGAAACTCAAAAGTTTGATGCGGAAGTGACAAAAAATCCAGTGATTGTGAACTTGCTTCCCGATCCTGTAATGGAACTTAGACAACAGCTAAATGGTAGGATAGCTGGTGACACTGTTCTGAAGATTTTGATGCAGAAAGTGAGGTCAGTGGAGGTAAACTTATCTGCGCTTGAGGATTGCATCAAAGAATTGAACAGGAGACAAGGGGCTACAATACCAAATCTTGAGAAAGAGTTGTCCAGATTATCAGAAAGCTTGGGACAAAGCAAGTCAGAGATCAAAGATCTCAGGCAGTGGAACACAAATATGGAAAAAGGAATATCTGAAGCTGAGTCATGGAAAGATGCTGTCTCATCTCAACTTAATGAATTAGCCAGAGAAAATAGCATGCTAAGATTAGATGTTCAAAAGGTTGTTGATGATCAAGCAAATTTGGAAACCAAAGAGCTTGCTGTGTTAGCAACGAGTCTCATTTTTGTGTGCCTTGCTGCTCTCAAGATAATTTCAGCACACATGTTGACGTCTCCTGCAGCATGCAATACCGATAAGAATCTCATTCACGGCATCAGTTGGATGGAACTGGTCCCACCAGATATGGTTCGAAGCATTATTGCATGCCATTTCCGGTGA 1725 0.4197 MKKNQPRHRSHVRCKCQGDHAIAEIFGLSFSFLFSLWCLLSIFYSKLRLVHGTGGAVLEFNESANSTSLGGLSEKLAKPTYSLVEITSLQQVFWQALGNNNNSTSNLVCKLQPSQEEKKLQAPQLPGENVHPASHRNIAPQEQDRGVNSELVNNITHRLESDGSVYNYASESKGSKVVAHNKEAKGAKNILGKDHDKYLRNPCSVGGKFVVIELSEETLVDSVKIANFEHYSSNFKEFELAGSLSYPTESWSMLGNFIAANAKHAQIFKLPEPKWARYLKLSLLSHYGSEFYCTLSVVEVYGINAIERMLKDLIVASVGSVPDKSPAHNISDTPSLKSEAGQIDRNGKEVESENDTVAAEISSNDETQKFDAEVTKNPVIVNLLPDPVMELRQQLNGRIAGDTVLKILMQKVRSVEVNLSALEDCIKELNRRQGATIPNLEKELSRLSESLGQSKSEIKDLRQWNTNMEKGISEAESWKDAVSSQLNELARENSMLRLDVQKVVDDQANLETKELAVLATSLIFVCLAALKIISAHMLTSPAACNTDKNLIHGISWMELVPPDMVRSIIACHFR. 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00249 574 Coils Coil 437 457 - -
Seca10g00249 574 MobiDBLite consensus disorder prediction 325 355 - -
Seca10g00249 574 MobiDBLite consensus disorder prediction 325 340 - -
Seca10g00249 574 MobiDBLite consensus disorder prediction 124 145 - -
Seca10g00249 574 SUPERFAMILY Galactose-binding domain-like 204 301 IPR008979 -
Seca10g00249 574 PANTHER MEMBRANE PROTEIN CH1 RELATED 135 534 IPR045120 GO:0016020
Seca10g00249 574 Gene3D - 169 313 - -
Seca10g00249 574 ProSiteProfiles SUN domain profile. 145 305 IPR012919 -
Seca10g00249 574 Pfam Sad1 / UNC-like C-terminal 180 302 IPR012919 -
Seca10g00249 574 Coils Coil 412 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00249 Seca-Chr10 2144583 2151727 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00249 - - gmx:102668828 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g00249 10 2144583 2151727 Seca10g00249 10 2144583 2151727 ECH