Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00160 ATGGTCGTGGTTGTTCCTCTTCCTGATTGCCTCTCCTTCCACCATTTCGCACTCTCCAGATTCACTTTCTACTCTCCCAATCATCGCCGGCTACTTCATCTTCAAGCTAAGGCCACCTTTATCACCAACTCCGACTCCTTCCAAGTTGGACGACCCATTGGCAGCTATGGCTTCATGAACGTCACCAGGCCAGGCACCGAATTTTCCTATGGAGATTTGGGAGGGCTCAAAACTCAAGACGTTGAAGAAGGCAGCGTTAAGATCAGGCTTTATGACGGGAGGGTTTCCCAGGGTCCACTTAGAGGAACTCCTGTTGTTTTTAAGGTTTATCCTGGAAGACGAGCTGGTGGGGCTGTGGCTGATATGATGGCTGCAAATGAGTTGAATTCCCACATGTTTCTTCAAAGCAGTTCTAAAGACATCAGTCAGCATCTCATATCACTTGTAGGTGGGTTTGAAACAACTACTGGAGAGCAGTGGCTTGCTTTCCGTGATGGTGGGAAATACAGTGCGGCAGACTATGCAAAAGTTGCAAGTGAGAGGGTATCAAAAGACATGTCTACCTGGAATCGCTTTGAACAAGGGGAAACGATCAAAAGAAGGCAATATTTTATTGTAAAGCTGCTTCAGGGTGCTATGAGAGGTCTAGCTTACATGCATGACCATGACAGATTGCATCAGAGTCTAGGGCCATTTTCTGTGGTTCTCAACTCAATTTCAGAAAAAGAAGCTCCCTATTTGATTCCAAGACTTCGGGATCTAGCCTTTTCTGTTAATGTCAGGTACTCGGAATTAGAAGATTCAGGACCACTCGCAGATGGGCTTTGGGCACGAGCCTCAGGTGCTGGTGCATACACGTATATGGAGAAAAGAGCTTTTGGAATAGCTGATGACATATACGAAGCAGGTCTTCTTTTTGCATACTTGGCTTTTGTTCCTTTTTGTGAAGCTGGTGTGATGGATGGCCTTTCCTTGCAAGTAAGCTGTGCTGCCAATCTGACTTCGTGTTTGGTGGCTGATGATTCTTTTCTTTGA 1035 0.4599 MVVVVPLPDCLSFHHFALSRFTFYSPNHRRLLHLQAKATFITNSDSFQVGRPIGSYGFMNVTRPGTEFSYGDLGGLKTQDVEEGSVKIRLYDGRVSQGPLRGTPVVFKVYPGRRAGGAVADMMAANELNSHMFLQSSSKDISQHLISLVGGFETTTGEQWLAFRDGGKYSAADYAKVASERVSKDMSTWNRFEQGETIKRRQYFIVKLLQGAMRGLAYMHDHDRLHQSLGPFSVVLNSISEKEAPYLIPRLRDLAFSVNVRYSELEDSGPLADGLWARASGAGAYTYMEKRAFGIADDIYEAGLLFAYLAFVPFCEAGVMDGLSLQVSCAANLTSCLVADDSFL. 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00160 344 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 28 326 - -
Seca10g00160 344 ProSiteProfiles Protein kinase domain profile. 47 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g00160 344 SUPERFAMILY Protein kinase-like (PK-like) 94 321 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00160 Seca-Chr10 1494461 1498858 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00160 - - gmx:100819981 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g00160 10 1494461 1498858 Seca10g00160 10 1494461 1498858 ECH