Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02545 ATGGCACTTCAGCGGCGGCGCCACCATTATTACCGCCTTATTATTCCAGTCATTTCTGGCATCACCGCTGCTCTGTTGTTTATCTTCTCTCTCCTATCTTTCTTAGCTCCTTCTCCAAACGATACTCATCGTCTCCCTCACTCTCACTCCTCGTTTAACGTTGAAACGGATTATGAAATTGGAATTCCCGTGTTCCGCGTTCCGACCGGTGGAGGAAAGTTGGATCGGAATATCTGGAGTTCTAGAAATTCCGAGCACTTCCATGGCTGCAGCGATGCGAGCAACAATTTTCCAAAAGCTCAAGTGATTACACAACCTAATCGATATTTGATGATTGCAACAAGTGGAGGCTTGAATCAACAAAGAACTGGGATTACTGATGCTGTTGTTGCTGCACGCATCTTGAATGCTACTCTTGTTGTTCCGAAATTGGATCAAAAATCTTTCTGGAAAGATTCTAGTAACTTCTCAGAGATCTTTGATGTTAACTGGTTTATCTCCTATCTTTCAAAAGATGTCAAAATAGTCAAGCAACTCCCAAGAAAGGGTGGGAAAACATTATCTCCATACAACATGCGTGTTCCAAGGAAGTGTAATGAAAGATGTTATATAAAACGTATATTGCCTGTACTCCTGAAAAAGCATGCTGTTCAGCTCAGCAAGTTCGACTACAGACTTGCAAACAGATTGGACACAGAGTATCAGAAGCTGAGATGCAGAGTTAATTACCATGCTTTAAAATTTACCAATCCAATACTTGCAATGGGTGAAAAATTGGTCCATCGAATGAGGATGAGAAGCAAACATTATATTGCATTGCACCTAAGATTTGAACCCGATATGCTTGCATTTTCTGGTTGTGATTATGGTGGAGGAGAGAAGGAGCAAAAGGAATTGGGCGCAATAAGGAGGAGGTGGAAGACACTACATAGAAGCAATCCTGATAAGGCAAGGAGGCAGGGAAAATGTCCGTTAACCCCAGAAGAAGTTGGTCTCATGCTTAGAGCATTGGGGTATGGTTCTGATGTTCATGTTTATGTGGCATCCGGAGAAGTATATGGAGGGGAAGAAACATTGGCACCTCTCAAAGCATTGTTTCCTAACTTCCATTCAAAAGATACTATTGCTACAAAAGAAGAATTAGAACCATTTTCTTCATTTTCTTCTCGCATGGCTGCACTTGACTTCATTGTTTGTGATGAAAGTGATGTATTTGTGACAAATAACAATGGCAATATGGCTAAAATATTAGCTGGGCGAAGGAGATACTTTGGGCACAAACCAACCATTCGTCCGAATGCTAAAAAACTCTATCGATTATTCTTGAATAGAAGCAAGTTGACTTGGGAAGTTTTTGCCTCTAGTGTCCATGCTTTCCAGAAAGGCTTCATGGGGGAGCCAAAGGAGATTAGACCAGGTAGAGGGAGTTTTCATGAGAATCCATCTACCTGCATATGTGAAGATTCCATAGCCAAAGTAGATAAAAATTCTGGACCAAGAAAATATGGGAAGGATAATGCAACAAAGAAAAATGTATCAAATGATGGCCTGGATGTTGATGATGAGACTGAATGGCCTGACATGGATTATGATGAAGATCAGAGTGATGAGAAGGGTGTGTTCAATGAAACAATTTCGGACGATGAAACTCAGAACTTCGAGGATCCTGAGTTGGAGGAATTTCTTTCAGATTAG 1695 0.4106 MALQRRRHHYYRLIIPVISGITAALLFIFSLLSFLAPSPNDTHRLPHSHSSFNVETDYEIGIPVFRVPTGGGKLDRNIWSSRNSEHFHGCSDASNNFPKAQVITQPNRYLMIATSGGLNQQRTGITDAVVAARILNATLVVPKLDQKSFWKDSSNFSEIFDVNWFISYLSKDVKIVKQLPRKGGKTLSPYNMRVPRKCNERCYIKRILPVLLKKHAVQLSKFDYRLANRLDTEYQKLRCRVNYHALKFTNPILAMGEKLVHRMRMRSKHYIALHLRFEPDMLAFSGCDYGGGEKEQKELGAIRRRWKTLHRSNPDKARRQGKCPLTPEEVGLMLRALGYGSDVHVYVASGEVYGGEETLAPLKALFPNFHSKDTIATKEELEPFSSFSSRMAALDFIVCDESDVFVTNNNGNMAKILAGRRRYFGHKPTIRPNAKKLYRLFLNRSKLTWEVFASSVHAFQKGFMGEPKEIRPGRGSFHENPSTCICEDSIAKVDKNSGPRKYGKDNATKKNVSNDGLDVDDETEWPDMDYDEDQSDEKGVFNETISDDETQNFEDPELEEFLSD* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02545 564 CDD O-FucT_plant 109 429 IPR024709 -
Rops9g02545 564 MobiDBLite consensus disorder prediction 496 564 - -
Rops9g02545 564 MobiDBLite consensus disorder prediction 548 564 - -
Rops9g02545 564 MobiDBLite consensus disorder prediction 518 534 - -
Rops9g02545 564 PIRSF UCP009360 1 494 IPR024709 -
Rops9g02545 564 PANTHER O-FUCOSYLTRANSFERASE 16 10 548 - -
Rops9g02545 564 Pfam GDP-fucose protein O-fucosyltransferase 109 423 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02545 Rops-Chr9 47736087 47742454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02545 109 493 Miscellaneous Gene Families AT1G22460 44.335 6.56e-98 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02545 - - gmx:100817698 960.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02545 9 47736087 47742454 Rops9g02545 9 47736087 47742454 ECH