Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02491 ATGAAAGTAACATGGAAGAACAACAAGAAGAAGCGTTGTTTGCCTGTGTTGTCGCACTTCAGTGACCTTCCTTTCGAAAACGACCAACCCCATCCACACACTAACAAGGACCCTGAAGAAGATGGTGATGGAGTGCGTGCTGATCACTCTGACTTGAACGAAGCAACACAACTCGCTAAGGAATTTCAAGCTCAAGGAGACAACCTTGCTGTCGATGGGAAGTACCGGGAAGCACTGGGTAAATGGGAAGCTGCTCTTGCGTTGGCTCCTGATGTTCCAGTGTTGCATGAACAAAAGGCCCAAGTTTTACTAGAAATTGGAGATGCTTGGAATGCTGTGAAGGCTGCAACTCGGGCTACTGAATTGGAACCATCTTGGGCTGAGGCATGGGTCACACTTGGCAGGGCACAGCTGAATTTTGGTGAGCCAGATAATGCTATTGAAAGCTTTGACAGAGCTTTAGCTTTCAAGCCTGATATTGAGGAAGCTCGAGATGATAGGAAAAATGCATTACATCTTGTAAAGAAGAGAAAGCAACTTCACTCATCTGGCTTGAGTGCCACTCAAAATCGTTATGTGGTAGGTGATAAGGATGCAAGCTCATGA 606 0.4604 MKVTWKNNKKKRCLPVLSHFSDLPFENDQPHPHTNKDPEEDGDGVRADHSDLNEATQLAKEFQAQGDNLAVDGKYREALGKWEAALALAPDVPVLHEQKAQVLLEIGDAWNAVKAATRATELEPSWAEAWVTLGRAQLNFGEPDNAIESFDRALAFKPDIEEARDDRKNALHLVKKRKQLHSSGLSATQNRYVVGDKDASS* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02491 201 MobiDBLite consensus disorder prediction 29 48 - -
Rops9g02491 201 Gene3D Tetratricopeptide repeat domain 48 192 IPR011990 GO:0005515
Rops9g02491 201 SMART tpr_5 127 160 IPR019734 GO:0005515
Rops9g02491 201 SMART tpr_5 93 126 IPR019734 GO:0005515
Rops9g02491 201 SMART tpr_5 59 92 IPR019734 GO:0005515
Rops9g02491 201 Pfam Tetratricopeptide repeat 99 159 - -
Rops9g02491 201 MobiDBLite consensus disorder prediction 21 48 - -
Rops9g02491 201 SUPERFAMILY TPR-like 57 178 IPR011990 GO:0005515
Rops9g02491 201 ProSiteProfiles TPR repeat region circular profile. 127 159 - -
Rops9g02491 201 ProSiteProfiles TPR repeat profile. 127 160 IPR019734 GO:0005515
Rops9g02491 201 PANTHER OSMOSIS RESPONSIVE FACTOR 1 200 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02491 30 159 EF-hand Containing Proteins AT2G32450 27.407 4.74e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02491 - - ccaj:109815748 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02491 9 46605017 46609497 Rops9g02491 9 46605017 46609497 ECH