Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02461 ATGGTGAAGGAAACAGAGTACTACGATATCCTCGGTGTCCCTCCCTCTGCCTCAGAAGATCAAATTCGCAAAGCTTATTATCAAAAGGCTAAGCAAGTTCATCCTGATAGAAACCCGAACGATCCTCATGCTGCTGAGAAGTTTCAGATTTTGGGGGAAGCGTACCAAGTTTTGAGTGATCCGGTGCAGAGGAATGCTTACAATCAAAATGGGAAGCATTCTGTATCTAGAGAAACTATGCTTGACCCCACGGCTGTCTTCGCCTTGCTCTTTGGAAGTGAATTGTTTGAGGACTACATAGGGCATCTAGCTGTGGCATCGATGGCTTCTTCTGAACTAGCTGATGAATCTGAGGATTCTGATAAACTGCATGAAAAGTTAAAGGCTGTCCAGAGAGAAAGGGAAGAAAAGCTAGCAAGATTTCTGAAGGATTTTCTTGGCCAATATGTCCGTGGTGACAAAAAGGGATTCTGCCAGCATGCAGAATCTGAAGCAAAACGGCTTTCTCATTCAGCCTTCGGAATTGATATGTTACGTACCATCGGCTATATATATTCAAGACAGGCAGCACAAGAACTCGGGAAAAAAGCCATTTATCTCGGAGTGCCATTTCTGGCTGAATGGGTTCGCAATAAAGGACATTTCTGGAAATCACAGTTCACAGCTGCTAAAGGTGCTTATCAGTTACTTCAGCTTCAAGAAGACATCCGCAAGCAATTTAAAGTGGATGGTAGTGGCCATGAAAATGATGTTGACTCTCATCTTCGTCTTAATAAGGATACATTGATGAATTCCTTGTGGAAGTTAAATGTAGTGGACATAGAAGTAACCGTTGTACACGTGTGTCAAATGGTGCTAAAGGAAAACAACGTTAAGAAAGAGGAACTTAAAGTTCGGGCTACCGCTCTTAAAATTCTTGGGAAGATATTTCAGGACAAGAATTCAAAAGAAGGAGAAACATTAAAGAAGAAAATCGCCACTGATTCTGATGATGAAGGAAGCAGTTCTGATTCTTCAGAAGATGAATCGCCTAGAGCACTTTCCTATCGGACTCCCTTTTTCACTCAGGGTCTCGGTAGGCTCTTCAAATGCCTTTGTAATCCAGCATTTGATGTTGATGATGAAGAGATAGTTTACAAGAGCAAATGA 1149 0.4195 MVKETEYYDILGVPPSASEDQIRKAYYQKAKQVHPDRNPNDPHAAEKFQILGEAYQVLSDPVQRNAYNQNGKHSVSRETMLDPTAVFALLFGSELFEDYIGHLAVASMASSELADESEDSDKLHEKLKAVQREREEKLARFLKDFLGQYVRGDKKGFCQHAESEAKRLSHSAFGIDMLRTIGYIYSRQAAQELGKKAIYLGVPFLAEWVRNKGHFWKSQFTAAKGAYQLLQLQEDIRKQFKVDGSGHENDVDSHLRLNKDTLMNSLWKLNVVDIEVTVVHVCQMVLKENNVKKEELKVRATALKILGKIFQDKNSKEGETLKKKIATDSDDEGSSSDSSEDESPRALSYRTPFFTQGLGRLFKCLCNPAFDVDDEEIVYKSK* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02461 382 Gene3D DnaJ domain 1 86 IPR036869 -
Rops9g02461 382 Pfam DnaJ domain 6 68 IPR001623 -
Rops9g02461 382 SMART dnaj_3 5 63 IPR001623 -
Rops9g02461 382 CDD DnaJ 6 60 IPR001623 -
Rops9g02461 382 PRINTS DnaJ domain signature 26 41 IPR001623 -
Rops9g02461 382 PRINTS DnaJ domain signature 43 63 IPR001623 -
Rops9g02461 382 PRINTS DnaJ domain signature 8 26 IPR001623 -
Rops9g02461 382 Pfam X-domain of DnaJ-containing 131 323 IPR026894 -
Rops9g02461 382 MobiDBLite consensus disorder prediction 321 348 - -
Rops9g02461 382 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Rops9g02461 382 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Rops9g02461 382 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 2 334 - -
Rops9g02461 382 SUPERFAMILY Chaperone J-domain 2 101 IPR036869 -
Rops9g02461 382 Coils Coil 113 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02461 Rops-Chr9 45696058 45700407 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02461 7 81 Miscellaneous Gene Families AT1G16680 40.260 6.00e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02461 - - gmx:100793811 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02461 9 45696058 45700407 Rops9g02461 9 45696058 45700407 ECH