Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02439 ATGGTCACTAGTGAAAGTGACTACCAGCGGCACGGTGGCACTGGACCTTCCAGAGATGGCCAACGATCAAGACTAGATTGGGAGGCACGATGGTGGAGATATGAAGGAGAGGGAAATGAAAGAGATGATTTGTACAAGGTGATGTGTGCCATGGTGCCTTTGTATTTTGCAATGTTAGTAGCCTATGGTTCAGTGAAATGGTGCAAGATGTTCACCCCAGAACAATGTTCTGGCATCAACCGTTTTGTGGCTGTGTTTGCAGTTCCTGTGCTTTCCTTTCACTTCATTTCACTCAACAATCCTTACCAAATGGACACCAAGTTCATCATAGCAGATACTCTCTCAAAGCTCCTTGTCCTTCTCTTTCTCTCTCTTTGGGCCATTTTCTTTGCTAAAGGCTCCTTGGATTGGCTTATCACTCTCTTCTCACTTGCCACCTTGCCCAACACCCTTGTTATGGGTATCCCTCTCCTTCAAGCCATGTATGGTGACTTCACACAGAGTCTCATGGTGCAACTTATCGTCCTCCAATGCATCATTTGGTATACTCTATTGTTGTTCCTATTAGAATACAGAGCAGCAACCCTTTTGATCAAAAGCGAGTTCCCAGGGAACACAGCAGCATCCATAACCAAATTCGAAGTTGACGGCGACGTGATTTCCTTGGACGGCCACGACGTGCCGCTGCAAACGCAATCGGAAACCGACAACCACGGCCGAATTCGAGTTCGAATCCGACGATCCATTTCCTCAGCTCCAGAATCCAACTCATCAATCGGAAACCGTGTAACTCCGAGACCCTCTAACCTTTCTAATGCTGATATCTTTTCTATTAACACGCCGTTACACTTGCACGATGATGATCTTCCCTTCGGCTACCTCTCTGGATATGCTTCCTCTGATGTGTATTCGTTGAGGGCTTCTAATTTTAATGAGATGGAGATCACGACCACCACCGGAACGCCTGTTTGCGGGAGGTCTCCGGCGGTTTGGGAGTCGCCGGGGAAATGTCAGGGAGATGAGACACCAGGATGCAATAAGGACATTACTCTCTCAGACAAAGAAATAAGTTTCAGAGACAGCATCAAAGTCTCATTGCCAGGGGAAGCTGCAGACCCCAAAGAAGCAATTGTCAGTCATCAGAAAATGCCACATACCTTTGTTATGATAAGGCTTATACTTATTGTAGTAGGAAGAAAACTTTCTCGAAACCCTAATACATATTCTAGTGTATTAGGACTTCTTTGGTCTCTAATCTCCTTCAAATGGAATATCGAAATGCCTAGTCTTATCAAATCATCTATCAAAATCATCTCGGATGCAGGCCTTGGGATGGCTATGTTTAGCTTAGGGCTTTTCATGGCCCTTCAGCCACGTATCATTGCTTGCGGTACCAAAAGAGCAGCCATGGGAATGGCCATTCGCTTCTTATGTGGGCCTCTTGTAATGTCAGCATCTTCCATTGCCATTGGATTGAGACGAGACAAACTACATACTGCCATTGTACAGGCTGCTCTTCCACAAGGGATAGTGCCATTTGTATTTGCAAGGGAATATGGGCTGCATCCGGATATTCTGAGCACAGGGGTTATCTTCGGCATGTTAATTTCTTTACCAATAACTCTCCTATATTACATATTTCTTGGCTTGTGA 1653 0.4537 MVTSESDYQRHGGTGPSRDGQRSRLDWEARWWRYEGEGNERDDLYKVMCAMVPLYFAMLVAYGSVKWCKMFTPEQCSGINRFVAVFAVPVLSFHFISLNNPYQMDTKFIIADTLSKLLVLLFLSLWAIFFAKGSLDWLITLFSLATLPNTLVMGIPLLQAMYGDFTQSLMVQLIVLQCIIWYTLLLFLLEYRAATLLIKSEFPGNTAASITKFEVDGDVISLDGHDVPLQTQSETDNHGRIRVRIRRSISSAPESNSSIGNRVTPRPSNLSNADIFSINTPLHLHDDDLPFGYLSGYASSDVYSLRASNFNEMEITTTTGTPVCGRSPAVWESPGKCQGDETPGCNKDITLSDKEISFRDSIKVSLPGEAADPKEAIVSHQKMPHTFVMIRLILIVVGRKLSRNPNTYSSVLGLLWSLISFKWNIEMPSLIKSSIKIISDAGLGMAMFSLGLFMALQPRIIACGTKRAAMGMAIRFLCGPLVMSASSIAIGLRRDKLHTAIVQAALPQGIVPFVFAREYGLHPDILSTGVIFGMLISLPITLLYYIFLGL* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02439 550 MobiDBLite consensus disorder prediction 1 21 - -
Rops9g02439 550 NCBIfam auxin efflux carrier 42 550 IPR014024 -
Rops9g02439 550 Pfam Membrane transport protein 47 545 IPR004776 GO:0016020|GO:0055085
Rops9g02439 550 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 41 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02439 Rops-Chr9 45276733 45288974 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02439 42 528 Organic Solute Cotransporters AT1G77110 61.162 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02439 K13947 - gmx:100800139 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02439 9 45276733 45288974 Rops9g02439 9 45276733 45288974 ECH