Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02437 ATGCATATGCAAACCAGCCACTCCATCAAACCCCAAACTCTCCCAATTGCATGGACTCCAAGAAATGTCCGCCACCGAACATTCATGCCACCACCCAAATCCGCCGTCTCCGCCATCCCACCACCGCTGAAATCCCACAAAACCCACTCAATGCCACCGGAAAAGGTAGAAGTTTTCAAGTCACTAGAAAGCTGGGCTTCCCAGTCGGTGCTACCACTACTAAAGCCCGTGGAAGAATGCTGGCAGCCCCAGAACTTGGTCCCTGATTCCTCGTTGCCGTACGAGGAGTTCTCCGACCAGGTGAAGGCCCTTCGTGACCGTACTAAGGAGCTGCCGGACGAGTACTTTGTTGTGTTGGTGGGTGACATGGTGACGGAAGACGCGCTTCCCACTTACCAAAGCATGATCAACAACCTTGATGGGGTTGGGGATGAGATCGGGTCGAGCCCAAGCCCGTGGGCCGTGTGGACCCGGGCTTGGACTGCGGAAGAAAATAGGCACGGGGATTTGCTCAGAACTTATCTGTATCTTTCTGGTCGTGTTGATATGACCATGATCGAGAAGACTGTTCAGTACCTCATTGGAGCTGGCATGGACCCAGGGACAGAAAACAACCCATATTTGGGTTTTGTGTACACGTCATTCCAAGAGCGAGCTACCTTCGTATCACACGGCAACACGGCTCGGCTTGCTAAGGAAGGTGGTGATCCAGTGCTTGCACGCATATGTGGGACCATCGCTGCGGACGAGAAGCGACACGAGAAAGCATACTCGAGAATCGTTGAGAAGCTTCTAGAAGTGGACCCCACAGGAGCGATGATAGCCATAGGGGATATGATGGAGAAGAAGATAACAATGCCGGCACACCTTATGTACGATGGGCAAGACCCCAGGCTATTCGAGCACTTCTCTGCGGTGGCGCAGCGTATGGGCGTGTACACGGCCAATGACTACGCTGACATCTTGGAGTTTCTGATCGAACGGTGGAGATTGGAGAAGTTGGAAGGATTAACGGCTGAGGGAAAGAGGGCGCAGGATTACGTGTGCGGGTTAGCACCCAGGATTAGGAGGCTGCAGGAGCGTGCTGATGCACGTGCGCGTAAGATGAAGCCGCATGAGGTTAAGTTTAGCTGGATCTTCAATAAAGAAGTGCTTTTGTGA 1161 0.5297 MHMQTSHSIKPQTLPIAWTPRNVRHRTFMPPPKSAVSAIPPPLKSHKTHSMPPEKVEVFKSLESWASQSVLPLLKPVEECWQPQNLVPDSSLPYEEFSDQVKALRDRTKELPDEYFVVLVGDMVTEDALPTYQSMINNLDGVGDEIGSSPSPWAVWTRAWTAEENRHGDLLRTYLYLSGRVDMTMIEKTVQYLIGAGMDPGTENNPYLGFVYTSFQERATFVSHGNTARLAKEGGDPVLARICGTIAADEKRHEKAYSRIVEKLLEVDPTGAMIAIGDMMEKKITMPAHLMYDGQDPRLFEHFSAVAQRMGVYTANDYADILEFLIERWRLEKLEGLTAEGKRAQDYVCGLAPRIRRLQERADARARKMKPHEVKFSWIFNKEVLL* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02437 386 MobiDBLite consensus disorder prediction 31 50 - -
Rops9g02437 386 SUPERFAMILY Ferritin-like 44 385 IPR009078 -
Rops9g02437 386 Gene3D Ribonucleotide Reductase, subunit A 41 386 IPR012348 GO:0016491
Rops9g02437 386 FunFam Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic 40 386 - -
Rops9g02437 386 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 43 384 IPR005067 GO:0006631|GO:0045300
Rops9g02437 386 Pfam Fatty acid desaturase 54 380 IPR005067 GO:0006631|GO:0045300
Rops9g02437 386 CDD Acyl_ACP_Desat 54 362 IPR005067 GO:0006631|GO:0045300
Rops9g02437 386 PIRSF Dlt9_acylACP_des 10 386 IPR005067 GO:0006631|GO:0045300
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02437 Rops-Chr9 45249255 45251478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02437 30 384 Acyl Lipid Metabolism Gene Families AT1G43800 76.536 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02437 K03921 - gmx:100037478 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02437 9 45249255 45251478 Rops9g02437 9 45249255 45251478 ECH