Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02400 ATGGCAGAGAGCCTTCGTATGGCCGTTGCTGTTATTGGGAATGTTGCCTCTGTGTCCCTTTATGCTGCACCAACGGTTACCTTCAAAAGGGTCATAAGGAAGAAAAGCACAGAGGAGTTTTCTTGCATTCCTTATATCATAGCACTGTTGAACTGCCTCCTTTTCACTTGGTATGGATTGCCTGTTATAAGCTACAAGTGGGAAAACTTCCCTCTGGTCACAGTTAATGGAGTTGGGATAGTTTTTGAACTATCCTATGTTCTCATTTATTTCTGGTATTCTTCAGCCAAAGGAAAAGTGAAGGTAGCCATGACAGCAGTACCAGTTCTTTTAGTGTTCTGCGCCATTGCTTTGGTATCAGCTTTTGCCTTCCCTGATCATCGTCACCGAAAGTTACTCGTGGGAAGCATAGGCTTGGGAGTTTCAGTAGCAATGTATGCATCGCCTTTGGTTGTAATGAAGAAAGTGATACAAACCAAGAGCGTGGAATTCATGCCACTACCATTATCTTTGTGTTCATTCTTAGCTAGTCTACTGTGGCTGACTTATGGACTTCTCATTCGGGATATATTCGTTGCGGGACCGAGTGTGATTGGTGTTCCCTTGGGTATCCTCCAGCTAGTTCTCCACTGCAAATATTGGAAAAGGAGAGTTATGGAAGAACCAAACAAGATGGACTTGCAAAAAGGGAACATGGAGAAGGTGGACTTGGAAATGGGGGATATGGAAAAGGGGAACCTAGAAAAGAATGTGACAGTTCTTAGTAACTGCAACTCGTGA 780 0.4359 MAESLRMAVAVIGNVASVSLYAAPTVTFKRVIRKKSTEEFSCIPYIIALLNCLLFTWYGLPVISYKWENFPLVTVNGVGIVFELSYVLIYFWYSSAKGKVKVAMTAVPVLLVFCAIALVSAFAFPDHRHRKLLVGSIGLGVSVAMYASPLVVMKKVIQTKSVEFMPLPLSLCSFLASLLWLTYGLLIRDIFVAGPSVIGVPLGILQLVLHCKYWKRRVMEEPNKMDLQKGNMEKVDLEMGDMEKGNLEKNVTVLSNCNS* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02400 259 FunFam Bidirectional sugar transporter SWEET 7 99 - -
Rops9g02400 259 Coils Coil 254 259 - -
Rops9g02400 259 PANTHER RAG1-ACTIVATING PROTEIN 1 16 223 IPR047664 -
Rops9g02400 259 Gene3D - 132 226 - -
Rops9g02400 259 Pfam Sugar efflux transporter for intercellular exchange 9 97 IPR004316 GO:0016020
Rops9g02400 259 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016020
Rops9g02400 259 FunFam Bidirectional sugar transporter SWEET 130 223 - -
Rops9g02400 259 Gene3D - 10 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02400 Rops-Chr9 44282020 44284376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02400 1 259 Miscellaneous Gene Families AT5G53190 52.896 8.35e-98 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02400 K15382 - gmx:100785324 441.039