Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02176 ATGTCCGACCCGGAAACCAAACCCGAACTTGACTTCGCACCAACGGAGGTTCCTCCGCCGCAGCCCAACCCTGTCGCCTCCGTCTCCTTCAGCATATGGCCACCCACACAGCGCACACGTGACGCCGTTATCAACCGTTTGATTGAGACTCTATCCACCACTTCAGTCCTCTCCAAACGTTACGGCACAATGTCCGCCGATAAAGCCGCCGTCTTCGCCCGCCAGATCGAGGACGAGTCCTTCTCCGCCGCCTCTTCTTCCTCCTCCCCCGACGACGACGACATTCAGATCCTCCAGGTCTATTCCAAGGAGATCAGCAAACGCATGCTCGACACCGCTAAGGACAGAGCTCCGACTGTCGGTAACGGTGGTGCCTCCGACGTCGCCGCTCCTTCTCCCGCCGCCGTAGAGGTCGTCGCTGCCGACTCTTGA 432 0.5995 MSDPETKPELDFAPTEVPPPQPNPVASVSFSIWPPTQRTRDAVINRLIETLSTTSVLSKRYGTMSADKAAVFARQIEDESFSAASSSSSPDDDDIQILQVYSKEISKRMLDTAKDRAPTVGNGGASDVAAPSPAAVEVVAADS* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02176 143 PANTHER WPP DOMAIN-CONTAINING PROTEIN 1-RELATED 18 127 IPR044692 GO:0000278|GO:0048527
Rops9g02176 143 Gene3D WPP domain 29 122 IPR038214 -
Rops9g02176 143 MobiDBLite consensus disorder prediction 1 30 - -
Rops9g02176 143 Pfam WPP domain 29 118 IPR025265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02176 Rops-Chr9 39796057 39796766 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02176 - - gmx:547538 140.198
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02176 9 39796057 39796766 Rops9g02176 9 39796057 39796766 ECH
Rops9g02176 9 39796057 39796766 Rops10g01133 10 23480561 23481231 PCT