Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02093 ATGTTGAATCATGTGAGCAATAATAATAGCTGCTCATGGCTGTGGTTTGCAGTGAGACCCTACTCTAGAATTCGTCCCCCAAGGCCTGTTTCTGTTGAACCAGTAATCAGAGTATCTAACAACGTTGCCCGCTTGGATGTGCCCAAAGAAGGTCCAAAACCCAGACAACTGCTATCATTGCCTCCTTTTCCTGGTCACCCCTTACCTGGGAAGAACTCAATCAGTGATCCTGGACAACATGATCGTGTCACTGCTGTCAATTGGATTAAGTATTACTTCAAGGGCATGTGGAATTCTGTCATTGAGTCTCATTTCAGGGAAGGTCTTGTGCAAATGGAGGACCTAATTGCTGATGACTCTTCCACTCGGAAGGAAGAGCTGATGAAACCTATGCGAAAGATTAGACCTAATGAAGTGATGAAGCATGGGGCCAGAGTTCACGTCCCTGTATCAATTGCTGAGACTAGGATTTCCAAGAGATATGATGCTATACCAAGTGGAACACTATATCCAAATGCTGATGAAATTAAGTATCTGCAGAGGCTTGTGATTTACAAGGACTCAGCTATTATTGTGCTAAATAAACCTCCGAAATTGCCAGTCAAGGGAAATCTGCCAGTTCATAATAGCATGGATGCATTGGCAGCTGCTGCACTGTCTTATGATTATGATGAGGGTCCTAAACTGGTCCACCGTCTTGACAGAGAGAGCAGTGGCATCATTTTGTTGGGGAGAACAAAAGATAGTGTATCTCACCTTCAGTGGTTGTTCAGTAACATTAACAACGCAAAATCTTCTTGTAAGGCTTGGAATGATGCATGTGAAGCTACATATCAAAGGTATTGGGCATTAGTCATAGGTACTCCCAAGGAGAAGGAAGGCATAATTGATGCTCCTCTTTCCAAGGTGCTTCTTGATGATGGAAAGACTGAGAGGGTAATAATAGCTCATCATTCAAGTATAGAACCTCGCCAAGAGGCTGTAACTGAGTATCGGGTGCTTGGTCCAAAGATAAATGGATGCTCATGGGTTGAATTGCGTCCAATTACTTACCGGAAGCATCAGTTGCGTGTCCATTGTGCTGAAGCACTTGGCACGCCAATAGTAGGTGACTATAAGTATGGCTGGTTTGTGCATAGCAGATGGAAACAAATGCCACGTGTCGATATTGAGCCGACAACTGGAAAACCATATAAGATGCGTAGGCCAGTGGGCCTAGATGTTCAGAAGGGAAGTGTTCTATCTAAGGTCCCTTTATTGCATCTTCACTGCAGAGAACTTGTACTTCCCAACATTGCTAAGTTTCTGCATGTTTTTGAAAAGAGCTCAGAAGAACTGCACCCTTCACTTAGTGTGCAGCCTGATGTTCTTCGCTTTGTGGCAACAATGCCTTCACATATGAGAATTAGTTGGAATCTTATGTCATCTTATTTAGTTTGA 1440 0.434 MLNHVSNNNSCSWLWFAVRPYSRIRPPRPVSVEPVIRVSNNVARLDVPKEGPKPRQLLSLPPFPGHPLPGKNSISDPGQHDRVTAVNWIKYYFKGMWNSVIESHFREGLVQMEDLIADDSSTRKEELMKPMRKIRPNEVMKHGARVHVPVSIAETRISKRYDAIPSGTLYPNADEIKYLQRLVIYKDSAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGIILLGRTKDSVSHLQWLFSNINNAKSSCKAWNDACEATYQRYWALVIGTPKEKEGIIDAPLSKVLLDDGKTERVIIAHHSSIEPRQEAVTEYRVLGPKINGCSWVELRPITYRKHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRVDIEPTTGKPYKMRRPVGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLHVFEKSSEELHPSLSVQPDVLRFVATMPSHMRISWNLMSSYLV* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02093 479 MobiDBLite consensus disorder prediction 47 79 - -
Rops9g02093 479 Pfam RNA pseudouridylate synthase 190 361 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Rops9g02093 479 PANTHER MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE 82 474 - -
Rops9g02093 479 SUPERFAMILY Pseudouridine synthase 175 432 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Rops9g02093 479 Gene3D Pseudouridine synthase 174 438 - -
Rops9g02093 479 CDD PseudoU_synth_RluA_like 190 386 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02093 Rops-Chr9 38395562 38405819 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02093 - - gmx:100817786 871.307