Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02069 ATGTCATCTTCTTCTTCTGCAAACGACGACGTTCTCAGGCGCAACCGCATCCTCTCAAGTAAGCTCTACTTCGATGTGCCTCTGAACAAGGTCCCGCTTATTTACTCTGAATCTTACGACATAGCTTTTCTCGGCATAGAGAAATTGCATCCGTTTGATTCGTCTAAATGGGGAAGAATTTGCAAGTTCCTTGTTTCTTTTGGTGTTCTGGATAAAAATCACATTGTTGAGCCTCTAGAAGCTTCCAAGGATGACCTTCTAGTGGTACACTCAGAATCGTACTTGAATAGCCTGAAGGAAAGTTCGAAGGTTGCTATGATAATTGAGGTCCCTCCTGTGGCGTTATTTCCCAATTGTCTTGTGCAAAATAAAGTTCTTTTCCCATTCAGGAAGCAGGTTGGAGGAACTATATTGGCTGCGAAACTTGCAAAGGAGAGAGGATGGGCCATTAATGTAGGGGGAGGTTTTCATCACTGCTCTGCAGAAAAAGGAGGCGGATTTTGTGCTTATGCAGATATTTCTCTTTGTATCCACTTTGCTTTTGTTCGGTTGAATATATCAAGGGTGATGATCATTGATCTTGATGCACATCAAGGAAACGGTCATGAAATGGACTTTGCTGATGATAGCCGAGTCTATATCCTGGATATGTATAACCCTGGAATATATCCTTTGGATTATGTGGCAAGAAACTACATAAATCAGAAAGTTCAAGTAAAGAGTGGGACTCGTACAGAAGAGTACCTGCAGAAATTAGATGAAGCACTTGAGGTTGCTGGGCAAAGGTTTAATCCGGAGTTGGTAATTTATAATGCTGGAACTGACATCCTAGAAGGTGATCCATTAGGAATGTTGAAGATCAGTCCTGATGGCATTGCTCTTAGAGATGAGAAAGTTTTTCAGTTTGCTCGTGAGAAAAACATTCCTATCGTCATGCTCACTTCAGGTGGGTACATGAAGTCCAGTGCTAGAGTCATTGCAGATTCAATAGCCAATCTCTCGAAGAAAAGCTTGATAGAAACGAGTGGAGGTCCAAAGGCTACATAA 1047 0.4183 MSSSSSANDDVLRRNRILSSKLYFDVPLNKVPLIYSESYDIAFLGIEKLHPFDSSKWGRICKFLVSFGVLDKNHIVEPLEASKDDLLVVHSESYLNSLKESSKVAMIIEVPPVALFPNCLVQNKVLFPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSAEKGGGFCAYADISLCIHFAFVRLNISRVMIIDLDAHQGNGHEMDFADDSRVYILDMYNPGIYPLDYVARNYINQKVQVKSGTRTEEYLQKLDEALEVAGQRFNPELVIYNAGTDILEGDPLGMLKISPDGIALRDEKVFQFAREKNIPIVMLTSGGYMKSSARVIADSIANLSKKSLIETSGGPKAT* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02069 348 CDD HDAC_classIV 50 333 IPR044150 GO:0004407|GO:0016575
Rops9g02069 348 FunFam Histone deacetylase 11 31 340 - -
Rops9g02069 348 PRINTS Histone deacetylase superfamily signature 265 275 IPR000286 -
Rops9g02069 348 PRINTS Histone deacetylase superfamily signature 188 203 IPR000286 -
Rops9g02069 348 PRINTS Histone deacetylase superfamily signature 154 177 IPR000286 -
Rops9g02069 348 Gene3D Histone deacetylase domain 29 344 IPR037138 -
Rops9g02069 348 PANTHER HISTONE DEACETYLASE 2-RELATED 49 334 - -
Rops9g02069 348 Pfam Histone deacetylase domain 50 329 IPR023801 -
Rops9g02069 348 SUPERFAMILY Arginase/deacetylase 29 330 IPR023696 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02069 K11418 - gmx:100781276 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02069 9 38001403 38006159 Rops9g02069 9 38001403 38006159 ECH