Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02050 ATGTTTCCTTTTGTGCAAAACAATGGAAATGCAATTGAAGCATCCCCACATAGCATTAATGATAGGATACCTGAGAAACAACCTTACAGAACTTCTTATCACTTTCAGCCTCCTCAAAATTGGATGAACGATCCAAATGCACCAATGTACTACAAAGGTGTTTACCACCTTTTCTACCAACATAATCCTTATGCAGCAACCTTTGGTGAGAAAATGGTTTGGGGTCACTCTGTATCATATGATCTTATCAATTGGATTCATCTGAATCATGCTATTGAACCAAGTGAGGCATGTGACATTAACAGCTGCTTCTCTGGCTCAGCCACTATACTCCCAGGAGAAAAACCTGTTATTTTGTACACAGGGATTGATGATAATAAACATCAAGTTCAAAACTTAGCTATGTCAAAGAATCTATCTGATCCATTCTTAAGGGAATGGGACAAACACCCTCAAAACCCTGTCATGACTGCACCTAGTGGAGTTGAAGAGATTAACTTCAGAGACCCATCAACTGCTTGGCAAGGAAAGGATGGGAAATGGAGGGTAATCATTGGTGCTCAAAATGGTGATGAAGGGAAGGCTATTCTCTACAAAAGTGAGGACTTTGTTAACTGGAAAGTGGATCCAAATCCCTTCTATGCAACAGATAATACTGGGGCTGTTGAATGCCCAGATTTCTTTCCTGTGTCCATCAATAGCACAAGTGGGGTGGATACATCAGTCCAAGATCATGGTGTTAGGCATGTGTTGAAGATAAGCTATATACGCAGACAACATGACTACTATTTTGTTGGTGAATATGTGTCTGATCAGGAAAACTTTATTCCTGATGCTAAATTTACAGGAACTAGTTTGGACTTAAGGCTTGACTATGGCAATTTTTATGCTTCCAAATCATTTTTTGACTATGCCAAGAACAGGAGGATATTGTGGGGCTGGGTGACCGAGTCTGACACCTCTCAAGATGATATTGAGAAAGGATGGGCTGGTCTACAGACAATTCCAAGGCAAGTTTGGCTTGATAAAAGTGGGAAGCGATTGATGCAATGGCCAATTGAAGAGGTTGAAACACTACGTGACAAGAAAATTAGTATAACAGGAGAAAAACTTGTCAGTGGATCAACTCTTGAAGTCTCAGGCATCACTGCATCACAGGCTGATGTGGAAGTGGTGTTTGAGCTACCTGATCTAGAAAGTGCTGAGTGGCTTGATCCAAGTGAAGTTGATCCACAACTATTATGTAGCAAAGAATATGCATCAAGAAGTGGCATAATAGGGCCATTTGGTTTGTTAGCTTTAGCTTCAGAGGATCTCACAGAGCAGACTGCAGTGTTCTTCAGAATATATAGAACTTCCAATAGATATGTATGTCTGATGTGCAGTGACCGGAGCAGGTCTTCATTGCGACAGGACCTTGATAAAACCACATATGGAACTATCTTTGACATTGATCCCAATCTCAAAACGATTTCACTGAGAAGTTTGATTGACCACTCCATCATTGAGAGTTTTGGGGAGGGAGGGAGAGTTTGCATCACAAGTAGAGTTTATCCCTCTTTGGCTATAGACAATGATGCCCATCTTCATGTATTCAACAATGGAAGCCAGAGTATAAAGATCTCAAACCTGAACGCTTGGAGCATGAAGCAAGCAGAGTTTAGCCACGAGGGAAACATAACAAATGGCTGA 1692 0.4102 MFPFVQNNGNAIEASPHSINDRIPEKQPYRTSYHFQPPQNWMNDPNAPMYYKGVYHLFYQHNPYAATFGEKMVWGHSVSYDLINWIHLNHAIEPSEACDINSCFSGSATILPGEKPVILYTGIDDNKHQVQNLAMSKNLSDPFLREWDKHPQNPVMTAPSGVEEINFRDPSTAWQGKDGKWRVIIGAQNGDEGKAILYKSEDFVNWKVDPNPFYATDNTGAVECPDFFPVSINSTSGVDTSVQDHGVRHVLKISYIRRQHDYYFVGEYVSDQENFIPDAKFTGTSLDLRLDYGNFYASKSFFDYAKNRRILWGWVTESDTSQDDIEKGWAGLQTIPRQVWLDKSGKRLMQWPIEEVETLRDKKISITGEKLVSGSTLEVSGITASQADVEVVFELPDLESAEWLDPSEVDPQLLCSKEYASRSGIIGPFGLLALASEDLTEQTAVFFRIYRTSNRYVCLMCSDRSRSSLRQDLDKTTYGTIFDIDPNLKTISLRSLIDHSIIESFGEGGRVCITSRVYPSLAIDNDAHLHVFNNGSQSIKISNLNAWSMKQAEFSHEGNITNG* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02050 563 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 38 364 - -
Rops9g02050 563 MobiDBLite consensus disorder prediction 1 15 - -
Rops9g02050 563 ProSitePatterns Glycosyl hydrolases family 32 active site. 34 47 IPR018053 GO:0004553|GO:0005975
Rops9g02050 563 Gene3D Glycosyl hydrolase domain; family 43 39 365 IPR023296 -
Rops9g02050 563 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 364 549 - -
Rops9g02050 563 Pfam Glycosyl hydrolases family 32 N-terminal domain 34 352 IPR013148 -
Rops9g02050 563 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 25 553 - -
Rops9g02050 563 Pfam Glycosyl hydrolases family 32 C terminal 355 548 IPR013189 -
Rops9g02050 563 Gene3D - 366 549 - -
Rops9g02050 563 CDD GH32_Fruct1-like 40 341 - -
Rops9g02050 563 MobiDBLite consensus disorder prediction 1 23 - -
Rops9g02050 563 SUPERFAMILY Arabinanase/levansucrase/invertase 26 353 IPR023296 -
Rops9g02050 563 SUPERFAMILY Concanavalin A-like lectins/glucanases 352 551 IPR013320 -
Rops9g02050 563 SMART glyco_32 34 509 IPR001362 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02050 Rops-Chr9 37739992 37746842 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02050 44 555 Glycoside Hydrolase AT1G55120 56.322 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02050 - K01193 gmx:100777487 952.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02050 9 37739992 37746842 Rops9g02050 9 37739992 37746842 ECH