Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02049 ATGAAAATCTTTGTAGCACCACTACTACTTGTGATGTTTCCTTTTCTGCAAAACAGTGGAAATGCAATTGAAGCATCCACACACGGCATCAATGATCGGATACCTGAGAAACAGCCTTACAGAACTTCTTATCACTTTCAGCCCCAACAAAATTGGATGAACGCACCAATGTACTACAGAGGTGTTTACCACCTTTTCTACCAACATAATCCTTATGCAGCAACCTTTGGTGAGAAAATGGTATGGGGTCACTCTGTATCATATGATCTGATCAATTGGGTTCATCTGAATCATGCTATTGAACCAAGTGAGTCATATGACATCAATAGCTGCTGGTCAGGTTCATCTACTATACTCCCAGGGGAAAAACCAGTTATTTTGTACACAGGAATTGATGATAATAAACATCAAGTTCAAAACTTAGCTATGCCAAAGAATCTATCAGATCCATTCCTAAGGGAATGGGACAAACACCCTCAAAACCCTGTTATGACTCCACCTAGTGGAGTTGAAGTGAATAACTTCAGAGACCCATCAACTGCTTGGCAAGGAAAGGATGGAAAATGGAGGGTAGTAATTGGTGCTCAAAATGGTGATGAAGGGAAGGCTATTCTCTACAAAAGTGAGGATTTTGTTAATTGGAAAGTGGATCCAAATCCCTTATATGCATCAGATAATTATGGGGTTGTTGAATGCCCAGATTTCTTTCCTGTTTCCATCAACAGCACAAGTGGGGTGGATACTTCAGTCCAAAATCTTGGTGTTAGGCATGTGTTGAAGATAAGCTATCTAACTAGACAACATGACTACTATTTTCTTGGTGAATATGTCTCTGATCAGGAAAATTTTATCCCTGATGTTAAATTTACAGGAACTAGTTTGGACTTAAGGTTTGACTATGGCAAATTTTATGCTTCCAAGTCATTTTTTGACTATGCCAAGAACAGGAGGATATTATGGGGATGGGTGAATGAGTCTGACACCTCACAAGATGACATTGAGAAAGGATGGGCTGGTCTACAGTCGATTCCAAGGCAAGTTTGGCTTGATAAAAGTGGGAAGCGATTGATGCAGTGGCCAATTGAAGAGGTTGAAACACTACGGGACAAGGAAATCAGTATAAGGGGAGAGAAACTAGTCAGCGGATCAACTCTTGAAATCTCAGGCATCACTGCTTCACAGGCTGATGTGGAAGTGGTGTTTGAGCTACCTGATCTAGAAAGTGCTGAGTGGCTTGATCCAAGTGAAGTTGATCCACAACTACTATGTAGCAAAGAATATGCATCAAGAAGTGGCATAATAGGGCCATTAGGTTTGTTAGCTTTAGCTTCAGAGGATCTCACAGAACAGACTGCAGTTTTCTTCAGAATATATAGAGCTTCCAATAGATATGTATGTCTTATGTGCAGTGACCAGAGCAGGTCTTCATTGAGGCAGGACCTTGATAAAACCACATATGGAACTATCTTTGACATTGATCCCAATCTCAAAACGATTTCACTTAGAAGTTTGATTGACCACTCCATCATTGAGAGTTTTGGGGAGGGAGGGAGAGTTTGCATCGCCAGTAGAGTTTATCCCTCATTGGCTACAGACAAAGATTCCCATCTTTATGTATTCAACAATGGAAGCCAGAGTATAAAGATCTCAAAACTGAATGCTTGGAGCATGAAGCAAGCTGAGTTCAGCCAAGACGGAAATACAAGTTTTGCCTAA 1716 0.4068 MKIFVAPLLLVMFPFLQNSGNAIEASTHGINDRIPEKQPYRTSYHFQPQQNWMNAPMYYRGVYHLFYQHNPYAATFGEKMVWGHSVSYDLINWVHLNHAIEPSESYDINSCWSGSSTILPGEKPVILYTGIDDNKHQVQNLAMPKNLSDPFLREWDKHPQNPVMTPPSGVEVNNFRDPSTAWQGKDGKWRVVIGAQNGDEGKAILYKSEDFVNWKVDPNPLYASDNYGVVECPDFFPVSINSTSGVDTSVQNLGVRHVLKISYLTRQHDYYFLGEYVSDQENFIPDVKFTGTSLDLRFDYGKFYASKSFFDYAKNRRILWGWVNESDTSQDDIEKGWAGLQSIPRQVWLDKSGKRLMQWPIEEVETLRDKEISIRGEKLVSGSTLEISGITASQADVEVVFELPDLESAEWLDPSEVDPQLLCSKEYASRSGIIGPLGLLALASEDLTEQTAVFFRIYRASNRYVCLMCSDQSRSSLRQDLDKTTYGTIFDIDPNLKTISLRSLIDHSIIESFGEGGRVCIASRVYPSLATDKDSHLYVFNNGSQSIKISKLNAWSMKQAEFSQDGNTSFA* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02049 571 Gene3D Glycosyl hydrolase domain; family 43 49 372 IPR023296 -
Rops9g02049 571 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 35 561 - -
Rops9g02049 571 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 372 557 - -
Rops9g02049 571 Gene3D - 373 557 - -
Rops9g02049 571 Pfam Glycosyl hydrolases family 32 C terminal 363 556 IPR013189 -
Rops9g02049 571 SUPERFAMILY Concanavalin A-like lectins/glucanases 360 559 IPR013320 -
Rops9g02049 571 CDD GH32_Fruct1-like 51 349 - -
Rops9g02049 571 Pfam Glycosyl hydrolases family 32 N-terminal domain 45 360 IPR013148 -
Rops9g02049 571 SUPERFAMILY Arabinanase/levansucrase/invertase 37 361 IPR023296 -
Rops9g02049 571 SMART glyco_32 45 517 IPR001362 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02049 Rops-Chr9 37736909 37743374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02049 54 570 Glycoside Hydrolase AT1G55120 54.839 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02049 - K01193 gmx:100777487 979.933