Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02030 ATGAAGCTTTGGTGCCTTCTATGCTTCAACGAAGAAGGAGAAAAAGAAGAAGACGAAGAAGAACAAGAGGTGTTAGTAGAAGAGAAACAACCTAATATTCTCAAGACTATGAACGAGGATAACATTATTCAAAATGACATCGTCGGTTCTGCTGGACCTGACGACAACGACGACGACGCTGATGTCGGAGATAACGACTTCAGTTTGATTGACGAGATTTCGCGGCGGGCGGATGAGTTCGACTCATGGTCCGGCGTGCGGCGGTCGGAGGGAGAGAGTAGCTCCGCCGTGGTGGCTGCTGGTTCGGCTGAGGAGATTCGCGATTCGAGCCACAAGCGGGCTAAGTTCTACACTGATGAGTGTCACTTTGCGATCCCTACATCTTCGAGTACTGGGAAGTACAGTGGAGATTATGATTATATCCAAGGCTCATCTTATGATGCTTTTACATTGATGTGTACTGATGATGAGGAGGGTAATTTTGATTCTGGTTGTGGGAAAGACGGTGAAGGGAATGACAGTGACATCTCAAAATTAGAAGATCAAGAGGTCAGGATGGATCTCACGGATGACTTGTTGCATATGGTTTTCTCATTTTTGGATCATCCCAATCTCTGCAAAGCTGCCAGAGTTTGTAAGCAGTGGCGAGTTGCTAGTGCTCATGAAGATTTCTGGAGAAGTTTGAATTTTGAAGATCGGAACATATCTGTAGAACAATTTGAGGACATGTGTAGGCGTTATCCTAATGCCACGGCAATGAGCATATCTGGTCCCGCTACTTGCTTGCTTGTCATGAAGGCAATCTCTTCATTAAGGAATCTTGAGGTTTTAACATTAGGAAGAGGACAGATAGCGGATACTTTTTTTCTTGCTTTAACCGATTGTTCTATGTTGAAAAAATTGAATATCAATGATTCTACACTTGGCAACGGCATTCAAGAGATTTCCATCATTCACGAGAGATTGTGTCATCTTCAATTAACAAAATGCCGTGTGATGCGAATAGCAGTCAGGTGCCCACAACTTGAAACCATGTCATTGAAGCGCAGTAACATGGCACAGGTTGTGCTTAATTGCTCTCATCTGCGTGAGCTTGATATAGGCTCATGCCACAAACTTCCTGATGCTGCAATTCGTGCTGCTGCAACTTCATGCTCTGAACTAGTGTCTCTGGACATGTCTAATTGTTCATGTGTCAGTGATGAAACACTACGTGAAATAGCACAGATTTGTGCTAACCTTAGTTTTCTTGATGCATCATATTGCCCAAACATATCTTTGGAGTCTGTTAGACTGCTAATGTTGACAGTTCTAAAACTTCATAGTTGTGAGGGCATCACTTCCGCCTCAATGGCTGCAATAGCTCATAGTACTATGTTGGAGGTTTTGGAGCTTGACAATTGCAGTCTATTGACTTCAGTGTCTTTGGATCTTCCACGCTTGCAGAATATTAGATTGGTACACTGCCGCAAGTTTGTTGATTTGAACTTGAGGGCCATGATGCTTTCTTCTATCCTGGTGTCTAACTGCCCTGCACTCCATCGTATCAACATCACTTCCAAGTCACTTCAAAAATTAGCATTGCAAAAGCAGGATAGCTTAACCACATTAGCTCTGCAATGCCAATCTTTACAAGAAGTGGACCTCTCTGAGTGTGAATCATTGACAAACTCTGTATGTGATGTTTTTAGTGATGGTGGAGGATGCCCTATGTTGAAATCGTTAGTTCTTGATAATTGTGAGAGCTTGACATCAGTTCGGTTCATCAGCACCTCTTTAGTCAGTCTTTCCCTTGGTGGTTGCCGGGCAGTTACTACTCTTGAGCTAACGTGCCCTAATCTTGAGAAAGTCATTTTGGATGGTTGTGATCATTTGGAAAGAGCATCCTTTTGTCCTGTTGGTCTTCGGTCTCTCAATCTAGGAATATGTCCAAAATTGAACGTACTCAGCGTTGAAGCATTGTTTATGGTCTCACTCGAGTTGAAAGGATGTGGCGTACTATCTGAAGCATCCCTTAATTGTCCTCTCTTGACATCTCTGGATGCTTCCTTTTGCAGCCAACTCACTGATGACTGCTTGTCTGCAACAACTGCCTCATGCCCACTGATTGAATCATTAATATTGATGTCGTGCCCATCAATTGGTTTAGATGGACTTTGTTCTCTGCGATGCCTCCCAAATTTGACTCTGCTTGATCTATCATACACTTTCTTGGTGAATCTGCAGCCTGTTTTTGAGTCTTGTTCACAGCTAAAGGTATTAAAGTTGCAGGCATGCAAATATCTCACCGACTCATCACTTGAGCCTCTATACAAGGGGGGTGCTTTACCAGCTCTTCAGGAGTTGGACTTGTCTTATGGAACTCTTTGTCAATCTTCCATAGAAGAGCTTCTTTCTTGCTGCAGGCACCTTACACGTGTGAGCTTGAATGGCTGTGTGAATATGCATGATTTAAACTGGGGGTACAATCGTGGGCAGATTCCCGAGTTTCCTGTCCTTTCCATTGCAAGTTCCGTTGAGAATGCCCATGAGTCAAGTGAGCAACCCACTCGATTACTGCAGAACCTCAACTGTGTGGGATGTCCAAATATTAGGAAGGTTTTCATTCCATCAACAGCGCATTGTTCCCATTTATTGTTTTTAAACCTTTCTCTGTCAGCTAATTTGAAGGAGGTTGATGTAGCTTGTCTCAACCTATGCTGGCTTAATTTAAGCAATTGTTCCTCTTTGGAAGTTTTGAAGCTAGAGTGTCCGAGATTGACCAGTCTGTTCCTTCAGTCTTGCAACATTGATGAGGAAGCTGTTGAAGCTGCAATATCAAAATGCACTATGCTGGAGACTCTTGACGTTCGCTTCTGTCCGAAGATAAGCTCAATGAGCATGGGAAGATTACGTGCTGCATGTTCTAGTTTGAAGCGTATATTCAGCAGTTTGTCAACTTCATGA 2946 0.4325 MKLWCLLCFNEEGEKEEDEEEQEVLVEEKQPNILKTMNEDNIIQNDIVGSAGPDDNDDDADVGDNDFSLIDEISRRADEFDSWSGVRRSEGESSSAVVAAGSAEEIRDSSHKRAKFYTDECHFAIPTSSSTGKYSGDYDYIQGSSYDAFTLMCTDDEEGNFDSGCGKDGEGNDSDISKLEDQEVRMDLTDDLLHMVFSFLDHPNLCKAARVCKQWRVASAHEDFWRSLNFEDRNISVEQFEDMCRRYPNATAMSISGPATCLLVMKAISSLRNLEVLTLGRGQIADTFFLALTDCSMLKKLNINDSTLGNGIQEISIIHERLCHLQLTKCRVMRIAVRCPQLETMSLKRSNMAQVVLNCSHLRELDIGSCHKLPDAAIRAAATSCSELVSLDMSNCSCVSDETLREIAQICANLSFLDASYCPNISLESVRLLMLTVLKLHSCEGITSASMAAIAHSTMLEVLELDNCSLLTSVSLDLPRLQNIRLVHCRKFVDLNLRAMMLSSILVSNCPALHRINITSKSLQKLALQKQDSLTTLALQCQSLQEVDLSECESLTNSVCDVFSDGGGCPMLKSLVLDNCESLTSVRFISTSLVSLSLGGCRAVTTLELTCPNLEKVILDGCDHLERASFCPVGLRSLNLGICPKLNVLSVEALFMVSLELKGCGVLSEASLNCPLLTSLDASFCSQLTDDCLSATTASCPLIESLILMSCPSIGLDGLCSLRCLPNLTLLDLSYTFLVNLQPVFESCSQLKVLKLQACKYLTDSSLEPLYKGGALPALQELDLSYGTLCQSSIEELLSCCRHLTRVSLNGCVNMHDLNWGYNRGQIPEFPVLSIASSVENAHESSEQPTRLLQNLNCVGCPNIRKVFIPSTAHCSHLLFLNLSLSANLKEVDVACLNLCWLNLSNCSSLEVLKLECPRLTSLFLQSCNIDEEAVEAAISKCTMLETLDVRFCPKISSMSMGRLRAACSSLKRIFSSLSTS* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02030 981 SUPERFAMILY L domain-like 502 644 - -
Rops9g02030 981 Gene3D Ribonuclease Inhibitor 740 821 IPR032675 -
Rops9g02030 981 FunFam F-box/LRR-repeat protein 15 isoform C 834 977 - -
Rops9g02030 981 SUPERFAMILY RNI-like 210 475 - -
Rops9g02030 981 Gene3D Ribonuclease Inhibitor 844 979 IPR032675 -
Rops9g02030 981 SMART LRR_CC_2 674 699 IPR006553 -
Rops9g02030 981 SMART LRR_CC_2 385 410 IPR006553 -
Rops9g02030 981 SMART LRR_CC_2 700 725 IPR006553 -
Rops9g02030 981 SMART LRR_CC_2 917 941 IPR006553 -
Rops9g02030 981 SMART LRR_CC_2 411 436 IPR006553 -
Rops9g02030 981 SMART LRR_CC_2 942 977 IPR006553 -
Rops9g02030 981 SMART LRR_CC_2 478 503 IPR006553 -
Rops9g02030 981 SMART LRR_CC_2 541 566 IPR006553 -
Rops9g02030 981 SMART LRR_CC_2 611 636 IPR006553 -
Rops9g02030 981 SMART LRR_CC_2 359 384 IPR006553 -
Rops9g02030 981 SMART LRR_CC_2 801 838 IPR006553 -
Rops9g02030 981 SMART LRR_CC_2 748 773 IPR006553 -
Rops9g02030 981 SMART LRR_CC_2 569 599 IPR006553 -
Rops9g02030 981 FunFam F-box/LRR-repeat protein 15 180 429 - -
Rops9g02030 981 Pfam F-box-like 190 230 IPR001810 GO:0005515
Rops9g02030 981 Gene3D Ribonuclease Inhibitor 433 590 IPR032675 -
Rops9g02030 981 Gene3D Ribonuclease Inhibitor 183 432 IPR032675 -
Rops9g02030 981 Gene3D Ribonuclease Inhibitor 591 739 IPR032675 -
Rops9g02030 981 SMART fbox_2 188 228 IPR001810 GO:0005515
Rops9g02030 981 CDD F-box_FBXO41 190 229 - -
Rops9g02030 981 ProSiteProfiles F-box domain profile. 182 228 IPR001810 GO:0005515
Rops9g02030 981 FunFam F-box/LRR-repeat protein 15 741 826 - -
Rops9g02030 981 MobiDBLite consensus disorder prediction 36 63 - -
Rops9g02030 981 FunFam F-box/LRR-repeat protein 15 507 633 - -
Rops9g02030 981 SUPERFAMILY F-box domain 187 217 IPR036047 GO:0005515
Rops9g02030 981 Coils Coil 10 30 - -
Rops9g02030 981 SUPERFAMILY L domain-like 611 974 - -
Rops9g02030 981 PANTHER OS10G0396666 PROTEIN 169 981 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02030 Rops-Chr9 37440986 37448228 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02030 - - gmx:100782842 1535.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02030 9 37440986 37448228 Rops9g02030 9 37440986 37448228 ECH