Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02017 ATGGATTTCAGAGTGATGGGTTTGGATTCTCCATTGTTGCACACTCTGCACCACATGATGGACATGTCTGACGACACCGTTTTGGACAAGTCACACCATGCTCCAACACACACCTACGTACGAGATGCTAAGGCAATAGCTGCAACACCAGCGGACATTAAGGAATGTCCAAAGTCCTATGTTTTCGTGATAGACATGCCTGGGTTGAAATCTGGAGACATAAAGGTTCATGTGGAAGATGGGAACGTGCTTATGATAAGTGGTGAAAGGAAGAGAGAGGAAGAGAAAGAAGGTGCCAAGTATTTGAGAATGGAGAGAAGGGTTGGCAAGTTCATGCGTAAGTTCGTGCTCCCTGAGAATGCCAATACCGATGCCGTTTCAGCATTGTGTCAAGATGGTGTGCTAACTGTCACTGTTGAGAAATTGCCTCCTCCTGAGCCTAAGAAACCTAGGACTATTGAGGTTAAGATTGCTTAA 477 0.4549 MDFRVMGLDSPLLHTLHHMMDMSDDTVLDKSHHAPTHTYVRDAKAIAATPADIKECPKSYVFVIDMPGLKSGDIKVHVEDGNVLMISGERKREEEKEGAKYLRMERRVGKFMRKFVLPENANTDAVSALCQDGVLTVTVEKLPPPEPKKPRTIEVKIA* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02017 158 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 42 156 IPR002068 -
Rops9g02017 158 FunFam 17.3 kDa class II heat shock protein-like 11 157 - -
Rops9g02017 158 Gene3D - 8 157 IPR008978 -
Rops9g02017 158 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 13 156 IPR031107 -
Rops9g02017 158 Pfam Hsp20/alpha crystallin family 52 156 IPR002068 -
Rops9g02017 158 SUPERFAMILY HSP20-like chaperones 17 150 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02017 Rops-Chr9 37205051 37205527 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02017 K13993 - gmx:100813195 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02017 9 37205051 37205527 Rops9g02017 9 37205051 37205527 ECH