Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01972 ATGTTCCCATCACTGTCACCGCGTCCAAATATAGGCACCAAAAACTCTCCAAACCTTGCAAACACACGAGAAGACCACCAGCAGCCAGACCAGCAACACCAGCGCCACAGATCACCGTCCAGTCCGTCGGCCAGCAGCTCGCTAACCCAGATCGTCGGCGTCCAGCTCGCGTGCGCAGATCTCCGGCCAGCAACTCGTGCGCGCAGATCTCTGTCCAGATCGCGCAGTCCAGTCCACCTCGCTCCGACCAGATCTCACCGTCCAGTCCAGCTAGCGCCTGCCAGTGTCCATCTCGTGCCGGCCAGTTTAGCTCGCGCCGGTCAGTCCACCTCGTGCCGATCTGCACCTCCAAGGTACTTAGATTCCATTCCACACCCAATAACTAACTCCTTGCCCCTTCAATTACAAGTTTCTATTGGGAGATACAGAATGGCCAAAGCTGAATCTGGGAATGGATACACGCTAGACTCAGTGAGGGAGGCTTTGGTTAGACAAGAAGATACCATTGTTTTTGGTCTCATTGAGAGAGCAAAGTTCCCTATCAATTCTCACACCTATGATGAAAACTACACCGAAATTTCGGGTTTTTGTGGATCATTGGTCGAGTTTGTTGTTAAGAACACAGAGGCCGTTCAAGCTAAGGCTGGAAGATACAAAAACCCTGAAGAAAATCCCTTCTTCCCGGAAGATTTATCATCATCACTTGTGTTATCTTACCCCTTCACACAGATTTTGCATCCTGGAGCCGCTTCAATCAACATAAACAGGTCCATCTGGAAATTGTACTTTAATGAGTTGCTTCCATTGCTTGTTGCTTCGGGTGATGATGGCAACTATGCACAAACTGCAGCTAGTGATCTTTCATTATTGCAGGCCATCTCTAAAAGGATCCATTATGGAAAGTTTGTAGCTGAGGTGAAATTCAGGGATTCTCCTCAAGACTATGAGCCTTTAATTCGTGCTAAGGATAGAGAAGGGTTGATGAAATTGTTGACATTTGAGAGTGTTGAAGAGATGGTAAGGAAGAGAGTTGAAAAGAAGGCCAGTGTGTTTGGGCAGGAAGTGAGCCTAAACAGTGATGATGACAACAATGAAAAACGCAAGTTTGATCCATCTGTGGCTTCTCTATTGTACAAGAAATGGTTAATACCTCTTACCAAGGAGGTTCAGGTTGAGTACCTATTGCGCCGTCTAGATTGA 1200 0.4733 MFPSLSPRPNIGTKNSPNLANTREDHQQPDQQHQRHRSPSSPSASSSLTQIVGVQLACADLRPATRARRSLSRSRSPVHLAPTRSHRPVQLAPASVHLVPASLARAGQSTSCRSAPPRYLDSIPHPITNSLPLQLQVSIGRYRMAKAESGNGYTLDSVREALVRQEDTIVFGLIERAKFPINSHTYDENYTEISGFCGSLVEFVVKNTEAVQAKAGRYKNPEENPFFPEDLSSSLVLSYPFTQILHPGAASININRSIWKLYFNELLPLLVASGDDGNYAQTAASDLSLLQAISKRIHYGKFVAEVKFRDSPQDYEPLIRAKDREGLMKLLTFESVEEMVRKRVEKKASVFGQEVSLNSDDDNNEKRKFDPSVASLLYKKWLIPLTKEVQVEYLLRRLD* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01972 399 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 147 399 IPR037039 GO:0004106|GO:0009073
Rops9g01972 399 MobiDBLite consensus disorder prediction 65 91 - -
Rops9g01972 399 NCBIfam chorismate mutase 154 399 IPR008238 GO:0004106|GO:0009073
Rops9g01972 399 MobiDBLite consensus disorder prediction 8 25 - -
Rops9g01972 399 ProSiteProfiles Chorismate mutase domain profile. 146 399 IPR008238 GO:0004106|GO:0009073
Rops9g01972 399 FunFam Chorismate mutase 146 399 - -
Rops9g01972 399 MobiDBLite consensus disorder prediction 1 48 - -
Rops9g01972 399 PANTHER CHORISMATE MUTASE 131 399 IPR008238 GO:0004106|GO:0009073
Rops9g01972 399 SUPERFAMILY Chorismate mutase II 148 399 IPR036263 GO:0046417
Rops9g01972 399 MobiDBLite consensus disorder prediction 34 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01972 Rops-Chr9 36443127 36457394 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01972 K01850 - gmx:100791341 427.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01972 9 36443127 36457394 Rops9g01972 9 36443127 36457394 ECH