Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01971 ATGCAGAGATTCAAACCTCTTCTACCACAAAATAGGTTCTCATTCCGCACACTTTGCTCTCATCATCGAGCTTTTTCTGCTCAACCAAATTACGTGGAACGTGATGATTATGATGATTCACAGCAACAGATTTTAGTTGAAGGAAGAGCGAAATCGCGTGCAGCTATTCTCAACAGGCCATCTTCTCTGAACGCCCTCACTACTTCAATGGTTGCTCGGTTGAAGAGGCTGTATGATTCTTGGGAAGAAAACTCTGATATTGGCTTTGTTTTGATGAAGGGTAGTGGCAGAGCTTTCTGTTCTGGTGGAGATGTTGTTAAGCTATATCACTCACTCAATGAAGGAAATACTGAAGAAGCTGAACAGTTTTTTAAAACATTATATTCATTTGTATATCTTCAAGGGACATATCTTAAACCACATGTTGCCATTTTGGATGGAATGACAATGGGATGTGGATCTGGAATTTCTCTTTCAGGGATGTTCGGTGTGGTAACTGATAAAACTATCTTTTCTCACCCAGAGGCTCAAATAGGCTTCCACCCTGATGCAGGAGCTTCGTATTTGTTGTCTCATCTTCCTGGCTACTTAGGGGAATACTTGGCCCTTACAGGAGATAAGCTTAATGGTGTCGAAATGATTGCCTGCCGCCTTGCTACTCACTATACACTAAATGCAAGGCTTGCTTGGCTTGAAGAACGCCTTGGTAAACTGATCACAGATGATCCATCTGTTGTGGAGGATTCCCTTGCACAGTATGGTGATCTTGTATATCCAGACAAAAACAGTATCCTTCACAAGATTGATATGATTGATAGATGTTTCGGTCACGATACAGTGGAGGAAATTATTGAAGCTTTGGAGGAGGAGGCAGCCGAGTCTTATGACCAATGGTGTTTGACAACTCTTAGGAGAATAAGAGAAGCCTCCCCATTGAGCTTGAAAGTGATTTTACGATCTATACGTGAAGGTAGATTTGAAACTCTTGATCAATGTCTCGTACGTGAGCACCGCATATCCCTTCATGGAATTTCCAAGCATGTCTCCTCTGATTTCTTTGAGGGCGTTAGAGCACGAATGGTTGATAAAGATTTTGCACCAAAGTGGGACCCACCTAGTTTAAAGGAAGTATCAGAGGACATGGTTGAATGCTATTTCTCTCCGTTTAATGAAACTGAGTCTGAACTGGTGCTGCCAACAGCATTGCGAGAACCTTACATGTGA 1224 0.4216 MQRFKPLLPQNRFSFRTLCSHHRAFSAQPNYVERDDYDDSQQQILVEGRAKSRAAILNRPSSLNALTTSMVARLKRLYDSWEENSDIGFVLMKGSGRAFCSGGDVVKLYHSLNEGNTEEAEQFFKTLYSFVYLQGTYLKPHVAILDGMTMGCGSGISLSGMFGVVTDKTIFSHPEAQIGFHPDAGASYLLSHLPGYLGEYLALTGDKLNGVEMIACRLATHYTLNARLAWLEERLGKLITDDPSVVEDSLAQYGDLVYPDKNSILHKIDMIDRCFGHDTVEEIIEALEEEAAESYDQWCLTTLRRIREASPLSLKVILRSIREGRFETLDQCLVREHRISLHGISKHVSSDFFEGVRARMVDKDFAPKWDPPSLKEVSEDMVECYFSPFNETESELVLPTALREPYM* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01971 407 FunFam Probable 3-hydroxyisobutyryl-CoA hydrolase 2 38 402 - -
Rops9g01971 407 Coils Coil 277 297 - -
Rops9g01971 407 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 38 401 IPR032259 GO:0003860
Rops9g01971 407 SUPERFAMILY ClpP/crotonase 52 372 IPR029045 -
Rops9g01971 407 Pfam Enoyl-CoA hydratase/isomerase 54 386 IPR045004 -
Rops9g01971 407 CDD crotonase-like 57 221 - -
Rops9g01971 407 Gene3D - 38 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01971 Rops-Chr9 36426109 36434672 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01971 20 407 Acyl Lipid Metabolism Gene Families AT4G31810 71.939 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01971 K05605 - gmx:100808892 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01971 9 36426109 36434672 Rops9g01971 9 36426109 36434672 ECH