Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01970 ATGAAGTTTATGAAGTTGGGTTCGAAGCCTGATGCTCTTCAATCTGATGGAAAGTCTGTTAGGTATATATCATCTGAATTGGCTACAGATATTAGCATAATTGTTGGTGAAGTTAGGTTTGACCTTCACAAGTTCCCTCTACTGTCCAAGAGCAATCAATTACAAAAGCTGGTGTCAAAGGCTAATGAAGAGAATTCTGATGAAATTTACTTGGATGATTTCCCTGGTGGGCCCAAGGCCTTTGAGCTATGTGTAAAGTTTTGCTATGGAATGACTGTTACTCTTAATGCTTACAATGTTGTGGCTGCTAGATGTGCAGCTGAGTACCTTGAAATGACAGAGGATATTGATAGAGGAAACTTAATTTTTAAAATTGAGGTGTTTCTTAACTCAAGTATCTTTCGTAGCTGGAAGGATTCTATAATTGTTCTCCAAACTACTAAATCTCTTTTGCCATGGTCTGAGGATCTTAAGATCATTGGGAGATGCATAGATTCCATAGCTTCTAAAACTTCTGTTGACCCAGTGAACATCACTTGGTCTTACACTTATAACCGGAAATTAGCCGAGGTTGATAAAATTGTTGAGGACAAGATAACACCACAAGAGAAAATTGAGCCTGTTCCTAAGGATTGGTGGGTTGAAGATATATGTGAGCTGGACATTGATCTTTATAAACGGGTAATGATTACCGTGAAATCAAAGGGAAGAATGGATGGCGTTGTGATTGGCGAGGCACTGAAAGTCTATGCAGTAAGATGGTTGCCTGATTCTGTTGATGCATTGGTTTCTGATGCTCATGCCCGGAGGAACAAATCTTTGGTAGAAACAATTGTCTGTTTATTGCCATGTGATAATGGCATGGGTTGTTCATGTAGTTTCTTGCTGAAGCTATTGAAAGTGGCCATATTAGTCGAAGCTGATGAGTCCTCAAGAGAAATATTGATGAAGAACATTGGCCTAAAATTGCATGAAGCTTGTGTCAAAGATTTACTGATTCCAGCAAGATCTCCCCAGATTACCACATATGATGTTGATTTGGTGCTAGATCTTTTGAATCGATACATGACTAATGAAAAGGGAAGCCATGATATGGAGGTGGTGGATAGGATAGATAAAGTAAAGGATGAATCTATTTTACGGCATAGGTCTTTGTTGAATGTTGGCAAGTTGGTGGATGGTTATCTTGGAGAAATTGCACGTGATCCAAATCTCAGCCTCTCTAGTTTTGTTGATTTGTCACAGTCAATTCCGGAGTTTGCCAGACCAAACCATGATGGGCTGTACAGAGCTATTGATATATACTTGAAGGAGCACCCAAGTTTGACAAAAGCTGAAAGGAAGAAGATATGTGGGCTGATGGATGTCAAGAAATTGTCAGTGGATGCATCGAAGCATGCCGCACAAAATGAACGCCTTCCCCTTCGAGTTGTAGTGCAGGTTCTCTATTTTGAGCAGGTTAGAGCTTCTGCCAATGCGGGAATGCTTAGTAACAATTCACGTAATTCTTCACACACCATGATGAATGGAGATGAGGAATCTGAAAAAACTGTGGGAGAGAGCTGCCATTCACTCAACAACCAGACGAGTCACTTGAAGGTAAAAAATGAAGAGTTTCATAAGAATGGAAAATTGAACAAGAAGAATAGCAAAAACAGCAGAAGTGGCATGCAGTTGCTGCCATCAAGGTCAAGGAGAATCTTTGATAAGTTATGGATTGTGGGTAAGGGACAAGGAGAGAATAGAAGTTCAGAGACTTCAGGGAGTTCCAATAGCCCTACCTCTGTTGTCCCTGGAGATACCAAATCATCTGGTTCATCCTTAAGACACAGGAGGCATTCTATCTCTTAG 1851 0.4036 MKFMKLGSKPDALQSDGKSVRYISSELATDISIIVGEVRFDLHKFPLLSKSNQLQKLVSKANEENSDEIYLDDFPGGPKAFELCVKFCYGMTVTLNAYNVVAARCAAEYLEMTEDIDRGNLIFKIEVFLNSSIFRSWKDSIIVLQTTKSLLPWSEDLKIIGRCIDSIASKTSVDPVNITWSYTYNRKLAEVDKIVEDKITPQEKIEPVPKDWWVEDICELDIDLYKRVMITVKSKGRMDGVVIGEALKVYAVRWLPDSVDALVSDAHARRNKSLVETIVCLLPCDNGMGCSCSFLLKLLKVAILVEADESSREILMKNIGLKLHEACVKDLLIPARSPQITTYDVDLVLDLLNRYMTNEKGSHDMEVVDRIDKVKDESILRHRSLLNVGKLVDGYLGEIARDPNLSLSSFVDLSQSIPEFARPNHDGLYRAIDIYLKEHPSLTKAERKKICGLMDVKKLSVDASKHAAQNERLPLRVVVQVLYFEQVRASANAGMLSNNSRNSSHTMMNGDEESEKTVGESCHSLNNQTSHLKVKNEEFHKNGKLNKKNSKNSRSGMQLLPSRSRRIFDKLWIVGKGQGENRSSETSGSSNSPTSVVPGDTKSSGSSLRHRRHSIS* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01970 616 MobiDBLite consensus disorder prediction 577 616 - -
Rops9g01970 616 MobiDBLite consensus disorder prediction 495 561 - -
Rops9g01970 616 Pfam NPH3 family 211 464 IPR027356 -
Rops9g01970 616 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Rops9g01970 616 Pfam BTB/POZ domain 26 116 IPR000210 GO:0005515
Rops9g01970 616 PANTHER OS12G0117600 PROTEIN 25 561 IPR043454 -
Rops9g01970 616 ProSiteProfiles NPH3 domain profile. 211 488 IPR027356 -
Rops9g01970 616 SUPERFAMILY POZ domain 22 115 IPR011333 -
Rops9g01970 616 Gene3D Potassium Channel Kv1.1; Chain A 8 118 IPR011333 -
Rops9g01970 616 MobiDBLite consensus disorder prediction 579 604 - -
Rops9g01970 616 CDD BTB_POZ_NPY3-like 20 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01970 Rops-Chr9 36417581 36422854 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01970 22 518 EF-hand Containing Proteins AT3G44820 33.396 4.56e-94 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01970 - - gmx:100809437 1018.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01970 9 36417581 36422854 Rops9g01970 9 36417581 36422854 ECH