Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01963 ATGGCTTCTATGGCTTTCTCTACCACCTTCTTCACACCACTGAATGACTTCACCCAACCCAGAAGAACAAACTCAGTTCCTGCAATTTCCATGCCTTTGATCAAATCATCACTTGCTTCCTCAAAGTCGCCTTTTTTTCAACATGGGTTTTCTCAATCAACCTCTTTCAATTTTCCCAGGCTTCTTTTAAAGCCTAGGTCTCTCTCACTCCATGCAAGGGCAGCCACAGAGAAAACCATTTATGATTTCACTGTCAAGGATGTTGATAAGAAGGATGTTTCTCTTAACAAATTCAAGGGGAAGGTTCTCTTGATTGTCAATGTTGCTTCACGATGTGGTTTGACATCATCGAACTACTCGGAACTTTCACACTTGTATGAAAAATATAAAAACAAAGGTTTGGAGATTCTAGCTTTCCCCTGCAATCAATTTGGTATGCAGGAGCCTGGATCAAATCAAGAAATTAAGCAGTTTGCTTGCACTAGGTTTAAGGCAGAATTTCCGATTTTTGATAAGGTTGATGTAAATGGACCATTTACAGCTCCAGTATACACGTTTCTGAAATCAAGTGCTGGAGGCTTTCTGGGTGATCTTGTCAAGTGGAATTTTGAGAAATTCTTGGTTGATAAAAATGGTAAAGTTGTTGAAAGATACCCACCGACAACCTCTCCTTTTCAAATTGAGAAGGATATCCAAAAGTTACTTGCTGCGTGA 714 0.3964 MASMAFSTTFFTPLNDFTQPRRTNSVPAISMPLIKSSLASSKSPFFQHGFSQSTSFNFPRLLLKPRSLSLHARAATEKTIYDFTVKDVDKKDVSLNKFKGKVLLIVNVASRCGLTSSNYSELSHLYEKYKNKGLEILAFPCNQFGMQEPGSNQEIKQFACTRFKAEFPIFDKVDVNGPFTAPVYTFLKSSAGGFLGDLVKWNFEKFLVDKNGKVVERYPPTTSPFQIEKDIQKLLAA* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01963 237 FunFam Glutathione peroxidase 71 237 - -
Rops9g01963 237 SUPERFAMILY Thioredoxin-like 79 236 IPR036249 -
Rops9g01963 237 PRINTS Glutathione peroxidase family signature 98 115 IPR000889 GO:0004602|GO:0006979
Rops9g01963 237 PRINTS Glutathione peroxidase family signature 199 208 IPR000889 GO:0004602|GO:0006979
Rops9g01963 237 PRINTS Glutathione peroxidase family signature 134 150 IPR000889 GO:0004602|GO:0006979
Rops9g01963 237 ProSitePatterns Glutathione peroxidases signature 2. 137 144 IPR029760 -
Rops9g01963 237 PANTHER GLUTATHIONE PEROXIDASE 72 235 IPR000889 GO:0004602|GO:0006979
Rops9g01963 237 Gene3D Glutaredoxin 67 237 - -
Rops9g01963 237 Pfam Glutathione peroxidase 80 188 IPR000889 GO:0004602|GO:0006979
Rops9g01963 237 CDD GSH_Peroxidase 79 231 IPR000889 GO:0004602|GO:0006979
Rops9g01963 237 ProSiteProfiles Glutathione peroxidase profile. 70 237 IPR000889 GO:0004602|GO:0006979
Rops9g01963 237 ProSiteProfiles Thioredoxin domain profile. 74 236 IPR013766 -
Rops9g01963 237 ProSitePatterns Glutathione peroxidases active site. 100 115 IPR029759 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01963 Rops-Chr9 36235073 36242275 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01963 K00432 - gmx:100305775 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01963 9 36235073 36242275 Rops9g01963 9 36235073 36242275 ECH