Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01940 ATGTCCTTCATCTCCTCTCCTTTTATTTCATGCTTCCACCCATCAAAAACCACCGCCGACCACCATCCACCGCCGTCGACACCGATCTCTGGCAACCCCAACCACACCACCTATGTCTATCAAACCGACGCCGGCACCGTTTCACTAACATGGTCTCGTTCCATTCTGGGTCGCACCCTTCACGTTCATCTCAACCACCCATTTGATTCCTCTTCCTTTTACCTTCACATCAAACCCTTCGTTTTTTGGAAGAAACATGGAACCAAGAAGCTTTCCCATAATACCCTTCTCTTCTGGAACCTCTCCAAGGCCAGGTTCGGGTCCGGACCCGAACCACACTCCAAGTTCTACGTTGCCCTTGTCGTGAACCACGAGCTAACCCTTCTGGTCGGTGACATATCAACCAAGGACGCACGTGCCAAGTTCAGAGCACGTGACACTAAGAACCCTCAAGTCCTCGTGATGAAGAAGGAACACGTGGAGGTGGAAGCACATCATCATCACCAAGTGTATGCAACGAAAACGAGGCTGGGTGGGAAGGTAAGAGAGATAGAGATAAATTGTGAGGGTCATGGGAACACAAACATTAACAACAACAACAACTTGAGGCTCTTGTTTCATGTGGATGGAGAAAGGGTATTGGAAGTGAAGAGGTTGAAGTGGAAATTCAGAGGGAATGAGAAAGTTGAGGTTGATGGGGTTCCTGTTCAGATCTCTTGGGATGTTCATGATTGGCTATTTGATAAGGAAAATGGAAACAACAGTGACGGGTGTGCTGTTTTCATGGTCAAGTTCGAGGAAAACGAGGTACGAGGTGATAGGGAAGGAGGGGAGGTGGTGAATCTTTGGAATTGGAATTTGGGGTCTTGTGAAATTGGGAAAACGGGTAAGAGTTGGTCATCTTCATCTTTATCAATGTCATCTTCTGCTGGGTCTTTTGGTGGAAGTTCCTCTGTTATGGAATGGTCAAGTGTGGAGGAGAATGAGTTGGTTGTTCCACTTGGGTTTTCACTTCTTGTTTATGCTTGGAAAAGGTGA 1038 0.4711 MSFISSPFISCFHPSKTTADHHPPPSTPISGNPNHTTYVYQTDAGTVSLTWSRSILGRTLHVHLNHPFDSSSFYLHIKPFVFWKKHGTKKLSHNTLLFWNLSKARFGSGPEPHSKFYVALVVNHELTLLVGDISTKDARAKFRARDTKNPQVLVMKKEHVEVEAHHHHQVYATKTRLGGKVREIEINCEGHGNTNINNNNNLRLLFHVDGERVLEVKRLKWKFRGNEKVEVDGVPVQISWDVHDWLFDKENGNNSDGCAVFMVKFEENEVRGDREGGEVVNLWNWNLGSCEIGKTGKSWSSSSLSMSSSAGSFGGSSSVMEWSSVEENELVVPLGFSLLVYAWKR* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01940 345 PANTHER EXPRESSED PROTEIN 8 344 IPR008586 -
Rops9g01940 345 MobiDBLite consensus disorder prediction 15 35 - -
Rops9g01940 345 Pfam Plant protein of unknown function (DUF868) 33 344 IPR008586 -
Rops9g01940 345 MobiDBLite consensus disorder prediction 20 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01940 Rops-Chr9 35638076 35639412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01940 8 344 EF-hand Containing Proteins AT5G28150 32.081 3.80e-45 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01940 - - psat:127087751 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01940 9 35638076 35639412 Rops9g01940 9 35638076 35639412 ECH
Rops9g01940 9 35638076 35639412 Rops10g01363 10 26437053 26438789 PCT