Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01938 ATGGCTTCTTCAGTGCTCTCCGTAGCTTCAAACTCTGTCTCTCGCTCTGTTTCACTTTCGATGCTCGAAACCCATAAGGGAAAGCCCAAACTTGGAGGCAATGGTTTGAGATTTAGCAAGGAAGGAGCCAAGTCTTCTGGTCGGATCACTATGACTGTTGCGGTTAATGTTTCTCGATTTGAAGGCATACCAATGGCTCCTCCTGATCCAATTCTTGGAGTTTCTGAAGCATTTAAAGCAGACAATAGCGATGTCAAGCTCAATCTTGGAGTTGGGGCTTACAGGACAGAAGAACTGCAGCCATATGTGCTTGATGTTGTTAAGAAGGCAGAGAAGCTTATGCTGGACAGAGGGGAAAACAAAGAGTATCTCCCTATTGAGGGTTTGGCTGCATTTAATAAGGCAACGGCGGAGTTGTTACTCGGAGCAGACAACCCAGCAATCAAACAGCAAAGAGTTGCCACTGTCCAAGGTCTTTCTGGAACTGGTTCTCTGCGACTAGCTGCAGCTCTGATAGAAAGATATTTTCCTGGGGCAAAAGTTTTGATATCGTCTCCTACCTGGGGTAATCACAAGAATATTTTCAATGATGCTAGAGTCCCATGGTCTGAGTACCGATATTATGATCCGAATACAGTTGGATTGGATTTTGAGGGCATGATAGAAGATATAAAGTCAGCTCCTGAAGGATCTTTTGTGGTGCTTCATGGATGTGCTCATAACCCTACTGGTATTGATCCAACACCTGAACAGTGGGAAAAAATAGCTGATGTAATTCAACAAAAGAACCACATTCCATTTTTTGATGTCGCTTACCAGGGGTTTGCTAGTGGAAGCCTTGATGCAGATGCAGCATCTGTGAGATTGTTTGTGGCACGCGGTATGGAGGTTCTTGTAGCTCAGTCATACAGTAAAAATCTTGGTCTGTATGCTGAAAGGATTGGAGCAATCAATGTCATTTCCTCATCAGCAGAAGCTGCAGCAAGGGTAAAGAGCCAATTGAAAAGGATTGCTCGACCAATGTACTCCAATCCACCTATTCATGGGGCTAGAATTGTTGCCAATGTTGTTGGAAACACAGTTCTCTTTGATGAATGGAAAGCAGAGATGGAAATGATGGCAGGAAGGATAAAGAATGTTAGACAGCGGCTATATGATAGTATTTCTGCAAAAGACAAGAGTGGAAAGGATTGGTCATTCATTCTTAAGCAGATAGGCATGTTCTCATACACAGGCTTGAACAAGAACCAGAGTGACAATATGACAAATAAATGGCATGTATACATGACAAAGGATGGAAGGATTTCCCTGGCAGGATTGTCATTGGCCAAATGTGATTACCTTGCAGATGCTATTATTGACTCGTTTTATAATGTCAGCTGA 1383 0.4302 MASSVLSVASNSVSRSVSLSMLETHKGKPKLGGNGLRFSKEGAKSSGRITMTVAVNVSRFEGIPMAPPDPILGVSEAFKADNSDVKLNLGVGAYRTEELQPYVLDVVKKAEKLMLDRGENKEYLPIEGLAAFNKATAELLLGADNPAIKQQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPNTVGLDFEGMIEDIKSAPEGSFVVLHGCAHNPTGIDPTPEQWEKIADVIQQKNHIPFFDVAYQGFASGSLDADAASVRLFVARGMEVLVAQSYSKNLGLYAERIGAINVISSSAEAAARVKSQLKRIARPMYSNPPIHGARIVANVVGNTVLFDEWKAEMEMMAGRIKNVRQRLYDSISAKDKSGKDWSFILKQIGMFSYTGLNKNQSDNMTNKWHVYMTKDGRISLAGLSLAKCDYLADAIIDSFYNVS* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01938 460 Gene3D - 118 359 IPR015421 GO:0003824
Rops9g01938 460 PANTHER ASPARTATE AMINOTRANSFERASE 53 456 IPR000796 GO:0006520|GO:0008483
Rops9g01938 460 Pfam Aminotransferase class I and II 86 452 IPR004839 GO:0009058|GO:0030170
Rops9g01938 460 CDD AAT_like 87 452 - -
Rops9g01938 460 SUPERFAMILY PLP-dependent transferases 58 454 IPR015424 -
Rops9g01938 460 PRINTS Aspartate aminotransferase signature 332 357 IPR000796 GO:0006520|GO:0008483
Rops9g01938 460 PRINTS Aspartate aminotransferase signature 401 419 IPR000796 GO:0006520|GO:0008483
Rops9g01938 460 PRINTS Aspartate aminotransferase signature 233 252 IPR000796 GO:0006520|GO:0008483
Rops9g01938 460 PRINTS Aspartate aminotransferase signature 264 276 IPR000796 GO:0006520|GO:0008483
Rops9g01938 460 Gene3D Aspartate Aminotransferase, domain 1 63 452 IPR015422 GO:0003824
Rops9g01938 460 FunFam Aspartate aminotransferase 348 452 - -
Rops9g01938 460 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 302 315 IPR004838 GO:0003824|GO:0009058|GO:0030170
Rops9g01938 460 FunFam Aspartate aminotransferase 118 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01938 Rops-Chr9 35548492 35553516 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01938 K00811 - gmx:547792 807.749