Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01922 ATGAATCAAGTTTGTTGGCCCTACTTTGATCCTGAGTTTGATTCTCTCCCTGAAAGAATATATGGCCCACCTTGCCGAGTCTGTATTGAAAATGAAAGCATGGAAGGATGCACAGTGGTTAAGGTAGATAGCGTTAACAAGCAGGGTCTCCTTTTGGAAGTGGTGCAAGTTTTGACAGACATGAACCTTCAAATCTGCAAAAGCTATATTTCATCTGATGCTGGCTGGTTCATGGACGTTTTTCATGTTAGAGATGAGCATGGCAACAAACTAACCGACCAGAAAGTCATTAATCACATCCTGCAGGCCATAGGAACAGCAAGAGGGTGTTCATCATCATCACATAATTACAACAACAATAACAACAACAATTCTTTCAATTCTTTGATGACCATGAACAAGACCTATTCCAAAAATGTTCTCCCATTGAACGAGCAACACACGACCATTGAAATGACCGGAGCAGACCGTCCCGGCCTATTTTCTGAGATCTCCGCCGCCTTAGCCAACCTTCATTGCAACATTGTTGAAGCTCATGCATGGAGCCACAATGCAAGGCTAGCATGTGTTGCATATATTTCAGACCAATCAACTGATTCCCCCATTGATGATCCTTCTCGCTTAGCCTCCATTGAGGGTTACCTAACCACCGTGCTCCGCGCCACCACCAACCCCAATAGTGTTGCACTTGGTGGCATCAACCACCCTGATGTTAAGACTTGTGAGCTTCTTGGTGGAGAAGGCACCATGACAACTGTGGAACGTAGGTTGCACCAACTCATGCTTTCGGTAAGGGATTTTGATGAGGTTCCCTCTTCCAAAGAGAGGCCTAAGATGGTGACTATTGAAAGTTGTGACCAAAAGGGGTATTCAATTGTGAGTGTTAAGTGTAAGGATCGTCCTAGACTCATGTTTGATACTGTTTGTACCTTAACAGACATGCAGTACGTCATTTTCCATGCTTCCATCAGTTCCCATGCAGGTTATGCATTTCAGGAGTATTTTATCCGGCACATAGATGGATATGCTTTGAATACAGCAGGCGAGAAGGAACGAGTAATGAAATGCTTAGAGGCAGCTATAGAACGTCGAGTTTGTGAGGGAGTTAGGCTAGAGTTGTGTGCAGACAACAGAGTTGGGTTGCTCTCTGACATAACCCGAGTACTCAGAGAGAATGGTCTTGTGGTTGTGCGAGCAGATGTTGAAACGCATAGAAATAAAGATGTGAATGCTTTCTATGTAAGAGACATATCAGGGAACCAGGTTGACATAGATTTCTTCAGTAAGTCGGTGAAGAGAGAAATGGGTTCAATCGTGACTCTCCATGTCAAGAATGAAACAAGCAGAAGAAAGACAACACCTGAAAAGTCACGTCTCTCATTCAGAGGCAAGCTAAGATCTGGGATTGAATTTCTTTCTCATGGTTTCATGACATAA 1437 0.4363 MNQVCWPYFDPEFDSLPERIYGPPCRVCIENESMEGCTVVKVDSVNKQGLLLEVVQVLTDMNLQICKSYISSDAGWFMDVFHVRDEHGNKLTDQKVINHILQAIGTARGCSSSSHNYNNNNNNNSFNSLMTMNKTYSKNVLPLNEQHTTIEMTGADRPGLFSEISAALANLHCNIVEAHAWSHNARLACVAYISDQSTDSPIDDPSRLASIEGYLTTVLRATTNPNSVALGGINHPDVKTCELLGGEGTMTTVERRLHQLMLSVRDFDEVPSSKERPKMVTIESCDQKGYSIVSVKCKDRPRLMFDTVCTLTDMQYVIFHASISSHAGYAFQEYFIRHIDGYALNTAGEKERVMKCLEAAIERRVCEGVRLELCADNRVGLLSDITRVLRENGLVVVRADVETHRNKDVNAFYVRDISGNQVDIDFFSKSVKREMGSIVTLHVKNETSRRKTTPEKSRLSFRGKLRSGIEFLSHGFMT* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01922 478 CDD ACT_ACR_2 148 221 - -
Rops9g01922 478 Pfam ACT domain 148 186 IPR002912 -
Rops9g01922 478 Pfam ACT domain 370 414 IPR002912 -
Rops9g01922 478 CDD ACT_ACR_1 37 108 - -
Rops9g01922 478 ProSiteProfiles ACT domain profile. 149 226 IPR002912 -
Rops9g01922 478 Gene3D - 144 222 - -
Rops9g01922 478 ProSiteProfiles ACT domain profile. 39 120 IPR002912 -
Rops9g01922 478 SUPERFAMILY ACT-like 367 425 IPR045865 -
Rops9g01922 478 SUPERFAMILY ACT-like 289 359 IPR045865 -
Rops9g01922 478 SUPERFAMILY ACT-like 34 98 IPR045865 -
Rops9g01922 478 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 11 443 IPR040217 -
Rops9g01922 478 ProSiteProfiles ACT domain profile. 370 446 IPR002912 -
Rops9g01922 478 SUPERFAMILY ACT-like 145 218 IPR045865 -
Rops9g01922 478 CDD ACT_ACR_3 290 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01922 Rops-Chr9 35178338 35188412 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01922 - - gmx:100820595 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01922 9 35178338 35188412 Rops9g01922 9 35178338 35188412 ECH