Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01921 ATGGCTTCCAACAAGCTCATCTCCACCTTCCTAGTGCTTTCTCTCCTTGCTTACTCAACATTCACTGATGCCTGCAACTCATGCAAGCCCACGCCCACTCCAGCAGAAAAGTGCCCCAAGGACACATTGAAGCTAGGAGTTTGTGCTGACATTCTTGGACTTGTTAATGTTGTTGTTGGATCTCCTGCTTCAAGCAAGTGTTGTGCATTGCTTGAGGGTTTGGCAGATTTGGAGGCAGCACTTTGTCTTTGCACTGCTATTAAGGCTAATGTGCTTGGGATAAACTTGAATGTTCCTGTCACACTCAGCCTCCTACTTAGTGCTTGTCAAAAAACAGTTCCAGCTGGTTTCCAATGTTAG 360 0.4611 MASNKLISTFLVLSLLAYSTFTDACNSCKPTPTPAEKCPKDTLKLGVCADILGLVNVVVGSPASSKCCALLEGLADLEAALCLCTAIKANVLGINLNVPVTLSLLLSACQKTVPAGFQC* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01921 119 Gene3D - 40 119 IPR036312 -
Rops9g01921 119 SMART aai_6 38 119 IPR016140 -
Rops9g01921 119 Pfam Hydrophobic seed protein 38 119 IPR027923 -
Rops9g01921 119 FunFam pEARLI1-like lipid transfer protein 1 36 119 - -
Rops9g01921 119 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 41 119 IPR036312 -
Rops9g01921 119 CDD HPS_like 37 119 IPR027923 -
Rops9g01921 119 PANTHER - 5 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01921 Rops-Chr9 35117024 35117853 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01921 31 119 Acyl Lipid Metabolism Gene Families AT4G22490 39.362 7.81e-18 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01921 - - gmx:547594 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01921 9 35117024 35117853 Rops9g01921 9 35117024 35117853 ECH