Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01910 ATGGCAAAACATTGGTCTCTCTTCCATGTTATGGATACCCTTTGGTTGTGTATCCTCCTTTCATCTGAAGTTATTTTGGCTGGTATTCAATGGGTTGGTAAGGTCTCTCCTGGATTTGGAGGTTCTCAAATGAATTGGATTGACAAGAATGGCATGTTCCTTGTGTCAAACAAGGGAGAGTTTGGTTTTGGCTTTGTCACCACTGCAAATGACAACACATTGTTTCTACTTGCAGTGGTCCACATGGACAGTACCAAGGTGGTTTGGGTTGCAAATAGAGCACTTCCTGTTTCTAATTCTGATAAATTTGTGTTTGATGAGAAGGGTAATGTCTTTTTACAAAAAGGAAGAACTGTGGTTTGGTCTACAGATACAAGTGACAAGGGAGTTTCTTCAATGGAATTGAAGGACACTGGAAATTTGGTTTTGCTTGGGAATGATAATAAAGTGATTTGGCAGAGTTTCAGCCATCCAACAGATACCTTGTTGCCAATGCAAGACTTCAAGGAGGGAATGAAACTTGTCAGTGAACCTGGTTCTAACAACTTGAACTATGTTCTTGAGATTGAATCTGGAAATGTTATTCTTTCAGCAGGTCCACAACCTTATTGGTCTATGCAAAAGGATAGCCGCAAAATCATCAATGAAAATGGAGATGTGGTAGCTTCAGCAACCCTTAGTGCAAATTCCTGGAGGTTCTATGATAAAAACAAATCCTTGTTGTGGCAATTTATTTTCACTAAAGATTCAGCTGTAAATGCCACTTGGATTGCAGTTTTGGGAAGTGATGGCTTTATCACTTTTTCCAATCTCCAAAGTGGAGGATTAATTAGTACCTCACCAACAAGAATACCTCAAGATTCTTGCAGTACACCAGAACCTTGTGGTCCCTATAACATATGCACTGGTGACACAAAGTGTAGCTGCCCTTCTGTTCTTAGCTCTCGTCCTAATTGCAAACCAGGATTTGTCTCTCCTTGTAACTCAAAAAGCTCCATTGAGCTCATGAAAGCTGATGATGGACTCAATTACTTTGCACTTGGGTTTCTCCCAGCCTCTTCAAAAACTGATTTGATTAGTTGCAAAAGTTCTTGCAGTAAAGACTGCTCTTGCCTTGCTGTGTTCTTTCACAGCAGTTCAGGGAACTGTTTCCTATTGGACAAGATTGGAAGCTTTGAGAAATCTGATAAGGATTCTGGTTTTGTCACTTACATTAAGGTCTCTAGTAATGACAAAGGCATAGGGGGAAGTGGAAGTAGCAATATGCAGACAATAGTTGTAGTGATCATTGTCATACTAACATTGTTTGTCATTTCTGGCATGCTCTTTGTGGGGCTTATATGCTACAAGAAAGAGCAAAATTTGCCTGAGACTCCCCAAGAACATTCAGAGGAGGACAATTTATTGGAGAATTTAACTGGCATGCCAATCCGAGCCTTTCAGGATTAG 1449 0.4023 MAKHWSLFHVMDTLWLCILLSSEVILAGIQWVGKVSPGFGGSQMNWIDKNGMFLVSNKGEFGFGFVTTANDNTLFLLAVVHMDSTKVVWVANRALPVSNSDKFVFDEKGNVFLQKGRTVVWSTDTSDKGVSSMELKDTGNLVLLGNDNKVIWQSFSHPTDTLLPMQDFKEGMKLVSEPGSNNLNYVLEIESGNVILSAGPQPYWSMQKDSRKIINENGDVVASATLSANSWRFYDKNKSLLWQFIFTKDSAVNATWIAVLGSDGFITFSNLQSGGLISTSPTRIPQDSCSTPEPCGPYNICTGDTKCSCPSVLSSRPNCKPGFVSPCNSKSSIELMKADDGLNYFALGFLPASSKTDLISCKSSCSKDCSCLAVFFHSSSGNCFLLDKIGSFEKSDKDSGFVTYIKVSSNDKGIGGSGSSNMQTIVVVIIVILTLFVISGMLFVGLICYKKEQNLPETPQEHSEEDNLLENLTGMPIRAFQD* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01910 482 Gene3D Hepatocyte Growth Factor 342 423 - -
Rops9g01910 482 Gene3D - 45 157 IPR036426 -
Rops9g01910 482 ProSiteProfiles Bulb-type lectin domain profile. 39 156 IPR001480 -
Rops9g01910 482 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 207 IPR036426 -
Rops9g01910 482 Pfam D-mannose binding lectin 87 168 IPR001480 -
Rops9g01910 482 CDD B_lectin 47 158 IPR001480 -
Rops9g01910 482 FunFam Serine/threonine-protein kinase 41 156 - -
Rops9g01910 482 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 45 460 - -
Rops9g01910 482 SMART blect_4 45 158 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01910 Rops-Chr9 34769159 34771694 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01910 - - gmx:100787500 732.635