Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01895 ATGAGAAGAATCTGGAATCTTCTCTCTAACTCTAAGCAACTCACTCAATTTGCATTTGCAACCTCCTCCAACTTCCGCCTCAATGTTCTTCGCTGTTACTCCCACCAAAAACGTCCAGGGCCGCTTGTGCGGTATAGGAATCTTGTTAAGCAAGGGAAGTTGCAGCACGATCCTTACCAAGAAAGTGTTGCTTCAGAGCTTGAGAACTTGCTTGCAAGGTTGGAGCAGTATGAGAGAGATATGGAGGAGTATCATGTTAATCTAGCTAAGTGGGAGAAGAATCGAGAGAACGAGAGGCGAAGGCTTCTCATGCAGGAAGTTGAGATGCAGCAGAAGGAAGAGGATTGGTGGAAACGGTTGAACAATAAGCTTACTGAAAGATGGGCTTCCAGGAAAAGACCAGAGAATATGGAGCCAGGTGTGGGAAAATGGGTGTCATATCTTAAACGTGAGAAGAAGTTGGATTCAATAGTTGGTCGCCTTCCAACTGCTCCTCCATCTCCTAAAGGACTTTACATATATGGCAATGTCGGCAGTGGGAAAACAATGCTGATGGACATGTTTTATAGTGCCACTGAAGGAATTGTTAAACATCGAAGAAGGTATCACTTTCATGAGGCAATGCTTAGAATAAATGAACATATGCACAAGATATGGAAAAATCAAACGGAAGAGAAGCCTTTGCAGTCAACCATTGCTGGTTGGATTATGAATCTTCCCGTTGACACTAAAGCTAAGACGTGGCTGGCTGCAGAAGAAAGATACAAGCAAGAGGTACAGATGAAAAACATTCTTCCTGCCGTAGCAGATGAGTTTTTCCTGGATCGAGAAGGGGATGAAAAGGGAGCTAGCATTTTGTGCTTTGATGAGATACAGACTGTTGATGTATTTGCTATTGTGGCTTTATCTGGAATTCTAAGCAGATTGCTGAGCAGTGGAACGATTATTGTGGCAACCAGTAATCGGGCACCAAAGGACTTAAATGAGGCTGGTATGCAACGGGAAATCTTCCATAAACTTGTCTCCAAATTGGAAGAACATTGTGAGAAGATATTGATAGGGAGTGAAATTGACTACCGTCGTTTTATAGCACAAAGATCAGTAAACCAGGTACACTATTTCTGGCCTATTGAAAAGGAAGCCGTAAATGAATTTGAGAAAAAGTGGCATGATGCAACAGGCAGATTTGGAGGAAGAATAATCTCCAACACCATCTCAGTGATGTTTGGAAGGACACTTGAGGTTCCTGAAAGCTGTGAAGGAGTTGCTCGCTTCACATTTGATTACCTTTGTGGTCGTCCGTTGGGTGCAGCAGATTATATTGCAGTAGCTGAAAACTATCACACTGTTTTCATATCTGATATTCCAGTGATGAGTATGCGCATCCGTGACAAGGCACGGAGATTTATCACCCTTATTGACGAGTTATACAATCATCATTGCTGCCTATGTTGTTTAGCATCCTCTTCAATTGATGAATTATTTCAAGGAACCGAGGAGGGCACACTTTTTGACTTGGAGAGTTTCCAGTTCGAAACAGAGATCGAAGGTGGGAAACTTCGCCGCAATGTCTTGGCAGAAGGCAATGTGGGCTCAGGAGGTGCCCCTGTTGGTATCACATCCATGCTATCTGCTCAAGAAGAGATGTTTGCTTTTCACAGAGCTGTCTCACGCCTGATTGAAATGCAAACGCCATTATACTTGGATGGAGTCCATTTAGCCAAGCTTCAACCAACTCCTATGGATCCCATGGAAGGAGAGGTCAACAATATTGCTTCTATGGAGAATTTGTTGAGATGCACACTGCTTGGACAATGGCGAATCCGAGAAGGCGGTTCTTGGGTTGCCCTAACTATAAGAATGCAGAAAGTCTCAAGGGAATATGATAATGCAAGGTCCTCCTCTTCTTGCATGACAGTTGCCAAATGGAAGCTTGGGCCTTCGCTCAAACTTGTACCAAGCTTGTGCCTTTTCAACATCGCCAAGGTTCCAGCAAATCCGGCATGCATCCTTTTGCCCCCTATTCTTGTTGCTCGTCGTAGGGGTGTAAGCGGGGTGTTTGAGAGAGAAACACAAACCAAATTCGCTTACCCTTCTCTCTCATTCTCTCTCACTAGCCACCCCTTATTACCTCCGTCTTCCTCTCACATTCTCCGCCGTTCCACCACCCCCTTTTTGATACCCTTATCATTAGAAAAGAAAAGAAAAAGGAAAAAACAGAAAAGGTTTTTGATTGATATAAGTATGAGAGGAATTCCACTATTTGATGATAAAAGAGATGGTTTTTTCTCTGTTTCAAATTTGGGGTCTCAATGGGGTGTTAATGACCAAGAAGAAGGGTATTACAACTACCCTGCAGGTTTATTTGCAAGCATCGGTCACATGGGAATGGGGTTTGGTATTCAACAACCAAACCCTTCTTCTTCTTCTGATTCACAAGGCAATAGTGGGATGAGGATTCCCTGCACTGAGTTGTATGTTAGGTATGTGCAATCAGAAGGGAAGGTGAAGATTGTTGGGGTTCCTGAGGAGGATGAGGAAGAGGTGGTGGAAGGTGTTAAGAGGAAGAAAAAGGGTGCCTTTAAAAGGCTTAAGATTAAGGTGAAGAACCCTTCATTGAGGAGGTTGATTAGTGGTGCTTTTGCAGGGGCAGTTTCACGTACTGCTGTGGCACCATTGGAGACTATAAGGACTCATTTGATGGTTGGAAGTAGTGGCCATTCTACTGGTGAGGTGTTCCATAATATCATGAAGACTGATGGGTGGAAAGGGTTGTTTAGGGGCAATCTTGTTAATGTGATTCGGGTTGCACCTAGCAAGGCCATTGAGCTATTTGCTTATGATACAGTTAACAAGAACCTCTCACCAAAGCCTGGGGAACAGCCCAAACTCCCTATTCCTGCATCATTGATTGCTGGTGCTTGTGCTGGAGTTAGTTCAACCATATGCACATATCCTCTAGAGTTACTCAAGACTCGATTAACTATCCAGAGAGGTGTTTATGATGGTCTACTTGATGCATTCATGAAAATAATTCGAGAAGAGGGTGCTTCAGAACTTTATAGAGGCCTTGCTCCTAGTCTTATTGGAGTTATTCCATATTCTGCCACCAATTACTTTGCATATGACACTTTAAGGAAAGCATACAGAAAATTTTTTAAACAAGAGAAGATTGGAAACATTGAAACCCTTTTGATAGGATCAGCAGCTGGTGCTATTTCAAGTACTGCTACTTTTCCACTCGAAGTGGCTCGCAAGCATATGCAAGTGGGAGCACTCAGTGGAAGGCAAGTTTACAAAAATGTGATTCATGCCCTTGCAAGCATACTTGAAGAAGAAGGGATCCAGGGTTTGTATAGAGGGCTGGGACCAAGTTGCATGAAGTTGGTGCCAGCTGCAGGAATCTCTTTCATGTGCTATGAAGCTTGCAAGAGGATACTGATAGAGGATGATGATGAAGAATAG 3465 0.4338 MRRIWNLLSNSKQLTQFAFATSSNFRLNVLRCYSHQKRPGPLVRYRNLVKQGKLQHDPYQESVASELENLLARLEQYERDMEEYHVNLAKWEKNRENERRRLLMQEVEMQQKEEDWWKRLNNKLTERWASRKRPENMEPGVGKWVSYLKREKKLDSIVGRLPTAPPSPKGLYIYGNVGSGKTMLMDMFYSATEGIVKHRRRYHFHEAMLRINEHMHKIWKNQTEEKPLQSTIAGWIMNLPVDTKAKTWLAAEERYKQEVQMKNILPAVADEFFLDREGDEKGASILCFDEIQTVDVFAIVALSGILSRLLSSGTIIVATSNRAPKDLNEAGMQREIFHKLVSKLEEHCEKILIGSEIDYRRFIAQRSVNQVHYFWPIEKEAVNEFEKKWHDATGRFGGRIISNTISVMFGRTLEVPESCEGVARFTFDYLCGRPLGAADYIAVAENYHTVFISDIPVMSMRIRDKARRFITLIDELYNHHCCLCCLASSSIDELFQGTEEGTLFDLESFQFETEIEGGKLRRNVLAEGNVGSGGAPVGITSMLSAQEEMFAFHRAVSRLIEMQTPLYLDGVHLAKLQPTPMDPMEGEVNNIASMENLLRCTLLGQWRIREGGSWVALTIRMQKVSREYDNARSSSSCMTVAKWKLGPSLKLVPSLCLFNIAKVPANPACILLPPILVARRRGVSGVFERETQTKFAYPSLSFSLTSHPLLPPSSSHILRRSTTPFLIPLSLEKKRKRKKQKRFLIDISMRGIPLFDDKRDGFFSVSNLGSQWGVNDQEEGYYNYPAGLFASIGHMGMGFGIQQPNPSSSSDSQGNSGMRIPCTELYVRYVQSEGKVKIVGVPEEDEEEVVEGVKRKKKGAFKRLKIKVKNPSLRRLISGAFAGAVSRTAVAPLETIRTHLMVGSSGHSTGEVFHNIMKTDGWKGLFRGNLVNVIRVAPSKAIELFAYDTVNKNLSPKPGEQPKLPIPASLIAGACAGVSSTICTYPLELLKTRLTIQRGVYDGLLDAFMKIIREEGASELYRGLAPSLIGVIPYSATNYFAYDTLRKAYRKFFKQEKIGNIETLLIGSAAGAISSTATFPLEVARKHMQVGALSGRQVYKNVIHALASILEEEGIQGLYRGLGPSCMKLVPAAGISFMCYEACKRILIEDDDEE* 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01895 1154 ProSiteProfiles Solute carrier (Solcar) repeat profile. 964 1048 IPR018108 -
Rops9g01895 1154 Pfam AFG1-like ATPase 166 499 IPR005654 GO:0005524|GO:0016887
Rops9g01895 1154 ProSiteProfiles Solute carrier (Solcar) repeat profile. 870 953 IPR018108 -
Rops9g01895 1154 Pfam Mitochondrial carrier protein 871 954 IPR018108 -
Rops9g01895 1154 Pfam Mitochondrial carrier protein 964 1051 IPR018108 -
Rops9g01895 1154 Pfam Mitochondrial carrier protein 1058 1149 IPR018108 -
Rops9g01895 1154 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1058 1146 IPR018108 -
Rops9g01895 1154 PANTHER ATPASE N2B 31 577 IPR005654 GO:0005524|GO:0016887
Rops9g01895 1154 FunFam AFG1-like ATPase isoform C 160 361 - -
Rops9g01895 1154 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 367 IPR027417 -
Rops9g01895 1154 SUPERFAMILY Mitochondrial carrier 871 1142 IPR023395 -
Rops9g01895 1154 Gene3D Mitochondrial carrier domain 867 1151 IPR023395 -
Rops9g01895 1154 Coils Coil 60 115 - -
Rops9g01895 1154 PRINTS Mitochondrial carrier protein signature 928 948 IPR002067 GO:0055085
Rops9g01895 1154 PRINTS Mitochondrial carrier protein signature 1021 1039 IPR002067 GO:0055085
Rops9g01895 1154 PRINTS Mitochondrial carrier protein signature 979 997 IPR002067 GO:0055085
Rops9g01895 1154 PRINTS Mitochondrial carrier protein signature 888 902 IPR002067 GO:0055085
Rops9g01895 1154 PRINTS Mitochondrial carrier protein signature 1067 1089 IPR002067 GO:0055085
Rops9g01895 1154 PRINTS Mitochondrial carrier protein signature 875 888 IPR002067 GO:0055085
Rops9g01895 1154 NCBIfam cell division protein ZapE 257 500 IPR005654 GO:0005524|GO:0016887
Rops9g01895 1154 Gene3D - 151 361 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01895 Rops-Chr9 34563994 34586163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01895 1057 1154 Organic Solute Cotransporters AT4G32400 33.000 2.98e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01895 - - mtr:11431777 937.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01895 9 34563994 34586163 Rops9g01895 9 34563994 34586163 ECH