Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01888 ATGCACTTGTTTTCCCTCTTTTCCTTCATTTTCTCCCCTTCTCCTATCTTTTATCCCAAAGTTGCAGAGTTTCACAACCCAGCCAAAATGAAGGGAAGGTTCATGTTCCTGTCGGTGTTCTTGTGTGCCACCTGTCATGTCTCCCTCTCCCTTAAGGACGGACTAGTGGCAAATGGAAATTTTGAGTTGGGACCAAAGCCATCAGACCTGAAAGGCACAGTGGTGAAAGGGGGAAAATACTCCATACCAGAATGGGAAATCTCAGGCTATGTAGAATACATAAAATCAGGACAAAAACAAGGTGACATGTTACTGGTAGTTCCAGAGGGTGCTTATGCAGTGAGACTTGGTAATGAGGCTTCTATTAAGCAAAGGATTAAAGTGATCAAGGGAATGCACTATTCAATCACATTATCTGTAGCACGCACGTGTGCACAAGAAGAGAGACTCAATGTGTCTGTGGCTCCAGATTCAGGGGTTATCCCAATACAAACATTGTACACAAGCAGTGGTTGGGATCCCATTGCTTATGGGTTCAAAGCAGAATATGATGTTGTGGAGATGGTTATTCATAACCCTGGAGTGGAGGAAGATCCAGCTTGTGGCCCACTTATTGATTCTATTGCTCTCAGAACTCTTTACCCTCCTAGACCAACTAACAAGAATCTATTAAAGAATGGTGGTTTTGAAGAAGGACCTTATGTGTTCCCGAACGCATCATGGGGTGTACTTATCCCACCCAACATAGAAGATGACCACTCTCCCTTACCAGGATGGATGGTAGAGTCTCTAAAGGCAGTGAAATACATAGACTCAGACCATTTCTCAGTCCCAGAAGGCACAAGAGCTGTGGAACTTGTAGCAGGAAAAGAAAGTGCAATTGCACAAGTAGCTAGAACCATTCCTGGCAAAACATATGTCCTCTCATTTTCTGTTGGTGATGCTAGCAATTCATGTGAAGGGTCAATGATTGTGGAAGCATTTGCAGGTAGAGACACTCTTAAAGTGCCTTACCAATCCAAAGGCAAAGGTGGGTTCAAACGTGCAGCCCTTAAGTTTGTAGCTGTAGGCCCAAGAACACGTATCATGTTCCTTAGCACGTTCTACACAATGAGAAGTGATGACTTCTCTTCACTTTGTGGGCCTGTGGTTGATGATGTGAAGTTGCTAAGCCTGCGTAAACCATAA 1188 0.4394 MHLFSLFSFIFSPSPIFYPKVAEFHNPAKMKGRFMFLSVFLCATCHVSLSLKDGLVANGNFELGPKPSDLKGTVVKGGKYSIPEWEISGYVEYIKSGQKQGDMLLVVPEGAYAVRLGNEASIKQRIKVIKGMHYSITLSVARTCAQEERLNVSVAPDSGVIPIQTLYTSSGWDPIAYGFKAEYDVVEMVIHNPGVEEDPACGPLIDSIALRTLYPPRPTNKNLLKNGGFEEGPYVFPNASWGVLIPPNIEDDHSPLPGWMVESLKAVKYIDSDHFSVPEGTRAVELVAGKESAIAQVARTIPGKTYVLSFSVGDASNSCEGSMIVEAFAGRDTLKVPYQSKGKGGFKRAALKFVAVGPRTRIMFLSTFYTMRSDDFSSLCGPVVDDVKLLSLRKP* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01888 395 Gene3D - 218 390 - -
Rops9g01888 395 PANTHER OS02G0527500 PROTEIN-RELATED 37 391 - -
Rops9g01888 395 FunFam DUF642 family protein 218 389 - -
Rops9g01888 395 Pfam Protein of unknown function (DUF642) 222 389 IPR006946 -
Rops9g01888 395 Pfam Protein of unknown function (DUF642) 54 210 IPR006946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01888 Rops-Chr9 34444078 34450153 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01888 - - gmx:100776765 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01888 9 34444078 34450153 Rops9g01888 9 34444078 34450153 ECH