Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01882 ATGCGACGCGCTCCTCCCTCTATCCATTTCCTCGCCGCCGCCACCACTGACGCCGCCACCGCCACCACTGACGCCGCCACCGCCACCGCCACAATGTCTTCGCGCCCGCACCACCGAGGTCGCGGCAGAGGATTCTCCGGCCGCTCCTACTCCGGCGGGAGAGGCCAGTTAGTTTCCGGCGACGCGCACTTCCGGTCGGTCCGCGACGCCAATTCGGGATTCCGGCGAGGGGAGAGGGGAAGCTTAGCGAACCAAACACAGTACCATCAGAATCCACCTTATAATCCGAGGCCTCATCCTCCGGCGCCGCCTCACTATCAAAATCCGCAGTTCAATCACCCTCCGCCGCAGTTTCGGCCGCCTCCGCCGTCGGATCGCCGACAACCGTTTCGTCCACCGCAGCATTTTCGCCCGCGGCCTCCAGATTATCGAGAGTGGGAGCTTGCGGTGACGCCGCCACCTCCTCCTCATTGTGAACGGTTTATAGTCCTTTCCTATAATATATTGGCTGACTACCTTGCTATGGACCACCGGAGAAAACTTTATTTTCACATACCTCCTTACCTGATGGACTGGCAGTGGAGAAAGAGAAATATAATTTTTGAGCTAGGGTTATGGTCTGCCGATATCATGTGCTTCCAGGAGGTGGATAGATTTCATGAGTTGGCAGAGGATTTGAAGTTTAAGGGATACAGTGGCGTCTGGAAGATGCGTACGGGCAATCCAATTGATGGCTGTGCAATCTTTTGGCGAACATCAAGGTTCAACTTGTTATATGAAGAAGGCATTGAGTTTAATAAGCTGGGACTTAGGGATAATGTAGCTCAAATATGTGTACTAGAGTTCATTAATCAAAATGGATCTCCCCCACCCAGCTTGACAGGTTCTAGTAAAGTTGTGGTTTGTAACATTCATGTGCTTTACAATCCCAATAGAGGAGAAATTAAGCTTGGCCAGGTCAGAGTGCTACTGGATAAGGCTAAAGCTGTTTCTAAACACTGGAATAATGCCCCTGTTGTTATCTGTGGGGATTTCAATTGTACCCCTAAGAGTCCATTGTACAACTTTATCTCAGAACAAAAGTTAGATCTGTCTGGAATAGATAGGGATAAGGTATCAGGACAGGCTTCTGCTACAATTCGCTCACCAAGGCCCAGTGGTCCTAATTCTAGTGAAAGATCTGATAATGGTTCAGCTCAGGCCACATCCACTGAAGGTGACAAGGAAGTTAATATTCAACAAAATAGTTCTTTGTCAAACGTGGAGAATCTGGACACAGAGAGTAGCAGTTTAGAGAATCAGTATCCTCACACTGTTTTGGATGTGTTTGATAAGTCTTGGACAAATGCGCAGTGTGGAAAGGAGAGTGATGCATATGCAGGAAAAGATACTCAGGAGACGGCTGTTGACCATAATAAGATTTTTGGTGAAGTTGACAGTGTAGAAGAAGAGCCAAATCCTAGGCTCCCTATTGATCATATAAATGGTGAGATTCATGACATCAATCCTGTGACCTCGTCAGCTCTTGAAACTGTTGACACTGATACAACTGAGATGAGCAGCACGGAACATATATCAGATGCTATTTCAACTTCAAATCAAGAATCATCAAGTGAAAAATCCAACTTACATTACCCTAAAGGAAATAAGCATATGGAGTTTGTTTGTTCCCAAACCTCTTTCCAGGAAGATGATCAATCTTCCAGGGTGAAGACAGATCTTGAGTCAACTGATCTTCTCAACATAGAAATTTCTTCAACCAAGCCATCCAGCCAGATTTCAGTTTCCAATGCTTTTGAAGTCCCTCATCCAGAGCATAGAGAAATCCCATCTCATGAGGTCAATGCTAATGATCAAATGAATTGCTCATCAACCTCATATCTAGTTGACAAATCACATCAATCAACCATTATTGACTTTCCATTAGATGAAAAACTAGAGAAATCGTTCCTTGATGAGATAGATAAAGCTGTTATAGGCAGTGAGAATATTGGTGAAGATAACAACAACGCTTTTATAACTGCCTTACATGATGCTGAAGAAGGTGTCGCTTTTGATCTTGGTCCATCAGCGAAATCGGATCTTGAAAAGTCATATCAGGTTGAGGAACTGGATTCTGTTTTCAAAGGCTTGGTGCTGCCTGCAGAAAGCAATGAAGTGGAGGATGACTTATCTCCAAGTCCGGTTTCCATATCTATCGATGCATGGAAAACTACTTATGATCCATCATTGTGGACCCCTATGGAGATAGAAACTGCAACAGGAAATGCAGAGTGCACCTTATTGGAGCACTCCTTACCTCTCAGGAGCACATACACCGAAGCTATGGATTCTTCAGGGACTAGAGACCCCCATGGAGAGCCCCTGGTGACCAGTTATAACAGGTGCTTCTTGGGCACTGTTGACTACATTTGGCGATCTGGAGGTCTGCAAACAACCAGAGTTCTTGCTCCAATACCTAAACATGCCATGGAATGGACTCCAGGATTCCCAACAAAGAAATGGGGTAGTGATCATATTGCCTTGGTTTCCGAGTTGGCTCTCTTGAAAGATGGTACCGACATCAGCAAGGATGTTTAA 2580 0.4585 MRRAPPSIHFLAAATTDAATATTDAATATATMSSRPHHRGRGRGFSGRSYSGGRGQLVSGDAHFRSVRDANSGFRRGERGSLANQTQYHQNPPYNPRPHPPAPPHYQNPQFNHPPPQFRPPPPSDRRQPFRPPQHFRPRPPDYREWELAVTPPPPPHCERFIVLSYNILADYLAMDHRRKLYFHIPPYLMDWQWRKRNIIFELGLWSADIMCFQEVDRFHELAEDLKFKGYSGVWKMRTGNPIDGCAIFWRTSRFNLLYEEGIEFNKLGLRDNVAQICVLEFINQNGSPPPSLTGSSKVVVCNIHVLYNPNRGEIKLGQVRVLLDKAKAVSKHWNNAPVVICGDFNCTPKSPLYNFISEQKLDLSGIDRDKVSGQASATIRSPRPSGPNSSERSDNGSAQATSTEGDKEVNIQQNSSLSNVENLDTESSSLENQYPHTVLDVFDKSWTNAQCGKESDAYAGKDTQETAVDHNKIFGEVDSVEEEPNPRLPIDHINGEIHDINPVTSSALETVDTDTTEMSSTEHISDAISTSNQESSSEKSNLHYPKGNKHMEFVCSQTSFQEDDQSSRVKTDLESTDLLNIEISSTKPSSQISVSNAFEVPHPEHREIPSHEVNANDQMNCSSTSYLVDKSHQSTIIDFPLDEKLEKSFLDEIDKAVIGSENIGEDNNNAFITALHDAEEGVAFDLGPSAKSDLEKSYQVEELDSVFKGLVLPAESNEVEDDLSPSPVSISIDAWKTTYDPSLWTPMEIETATGNAECTLLEHSLPLRSTYTEAMDSSGTRDPHGEPLVTSYNRCFLGTVDYIWRSGGLQTTRVLAPIPKHAMEWTPGFPTKKWGSDHIALVSELALLKDGTDISKDV* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01882 859 MobiDBLite consensus disorder prediction 375 432 - -
Rops9g01882 859 MobiDBLite consensus disorder prediction 519 547 - -
Rops9g01882 859 Pfam Endonuclease/Exonuclease/phosphatase family 164 365 IPR005135 GO:0003824
Rops9g01882 859 MobiDBLite consensus disorder prediction 93 129 - -
Rops9g01882 859 MobiDBLite consensus disorder prediction 519 543 - -
Rops9g01882 859 MobiDBLite consensus disorder prediction 16 34 - -
Rops9g01882 859 Gene3D Endonuclease/exonuclease/phosphatase 135 494 IPR036691 -
Rops9g01882 859 Gene3D Endonuclease/exonuclease/phosphatase 718 856 IPR036691 -
Rops9g01882 859 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 93 848 - -
Rops9g01882 859 MobiDBLite consensus disorder prediction 15 142 - -
Rops9g01882 859 MobiDBLite consensus disorder prediction 373 432 - -
Rops9g01882 859 SUPERFAMILY DNase I-like 152 363 IPR036691 -
Rops9g01882 859 MobiDBLite consensus disorder prediction 78 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01882 Rops-Chr9 34318025 34329463 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01882 230 360 EF-hand Containing Proteins AT1G02270 25.899 4.62e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01882 - - lang:109358231 1064.29