Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01879 ATGGCCACCCCAGCAAGTTATATATGCAAAAGAACTGTGGTGAGCACCAAGCCAGTTCAACCAGGAAAGTACTTCCCCTTATCTGTTTTGGATCGTTTCATGGAGAACAATCACATTAGGATGGTGTACTATTACCAAACTTTAGGAGAGGGAGAACTTGGAGAAGTTACCAAGAAGCTGAGAGAGACCTTATCAGAGATGCTTACCCATTTCCCCATAGTGACTGGAAGGTTGATAAGAGATGAAAGAGGGCATTGGAAGATCAAGTGCAATGATGCTGGTGTTAGAATGGTAGAGGCAAAAGCCAAAGGGAGTGTGGAAGGGTGGTTAAGAAGTGTGGATAGGGAAAAGGAACTCAAGCTTGTGTATTGGGAGGATATGCTTCATAAGTCTTATTATTGGTCCACTTTCTATGTCCAGCTGACAGAATTTGAAGAAGGTGGATTAGCAATTGGCCTAAGCTGCATTCATCTCTTGGCAGATCCCACTTGTGCAACCAGATTTATCAAGGCCTGGGCTGACATTTCATTGGGCAACAAAATGATATCTCCTCCAATATTCCATCCTTTACCTCCTAGAAGACCAGGAAACAAAAAGCCCAATCACAACCCATATATGGAGTTAATATATCACTATAAATCCTCAATTGAGAGGCCCATTTCTGTCAAGGAAGCAAGGTACACTACCATTTCCCTTTGCTTCTCAGATCATATGGTTCAGGCTTGCATGTCCATGGCCCAATCTAATGATGTATCTAGCCCAAAACCAACACCCTTTGAGGCACTAGCAGGATTGTTTTGGGTCTCTTTAAGCAAGGTCAAGGGATTGAGAAATGGACTTGTTGATATGTCTATATGTTTGGATGTGAGGAAAGTCTTGGGCTTAGATTATGGATTCTTTGGGAACTGCATGTTATATAATAAGGTTCATTTAGAAGGGAATTTAGGAGAGAACAAATTTCCACAAGCTGCTTGGGCCATAAGGGATGTTGTGGCTAAAATGGACAATGAGGGAATAATGGATCTAATAGAGTGGTTTGAAAATATTGATATAAATTCCCCCACAATGATGAATGGTCATGATCTGGTCTGTGCTAGTTTAGAGGATGTGGACCCTTATTTAGCTGTATTTCAAGATTGGTTCAAACCCATTAGAGTTTCATGTTACATAGAGCCAGTTTTGGGAGAAGGGCAGGTTTTGATTCTCCCAGCACCACCAGAGGAGGGTCCCTTAAGCAAGGTGGCTATGGTAACAGTTGAAGTGGAGGAGGCCATTAAGCTTTGTGAAGATGATCTTATTGCACAATTCTCACCCACCATCTTGATGAAATGTTAA 1335 0.4187 MATPASYICKRTVVSTKPVQPGKYFPLSVLDRFMENNHIRMVYYYQTLGEGELGEVTKKLRETLSEMLTHFPIVTGRLIRDERGHWKIKCNDAGVRMVEAKAKGSVEGWLRSVDREKELKLVYWEDMLHKSYYWSTFYVQLTEFEEGGLAIGLSCIHLLADPTCATRFIKAWADISLGNKMISPPIFHPLPPRRPGNKKPNHNPYMELIYHYKSSIERPISVKEARYTTISLCFSDHMVQACMSMAQSNDVSSPKPTPFEALAGLFWVSLSKVKGLRNGLVDMSICLDVRKVLGLDYGFFGNCMLYNKVHLEGNLGENKFPQAAWAIRDVVAKMDNEGIMDLIEWFENIDINSPTMMNGHDLVCASLEDVDPYLAVFQDWFKPIRVSCYIEPVLGEGQVLILPAPPEEGPLSKVAMVTVEVEEAIKLCEDDLIAQFSPTILMKC* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01879 444 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 17 401 - -
Rops9g01879 444 Gene3D - 213 429 IPR023213 -
Rops9g01879 444 Pfam Transferase family 10 405 - -
Rops9g01879 444 Gene3D - 6 206 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01879 Rops-Chr9 34289241 34290927 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01879 12 404 Acyl Lipid Metabolism Gene Families AT3G23840 24.874 1.22e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01879 - - psat:127096652 699.123