LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops9g01868	ATGGGTTCTTGCAAAGAACAAGAAAAAGAGCAAGCAAAGTGTGTGTGGGTTCATGGACCTATCATTGTAGGTGCTGGACCCTCGGGTATAGCAGTTGCTGCTTGTCTTTCTGAACATGGAGTACCAAGTGTTATTCTTGAGAGGAGTGATTGCATAGCTTCTCTGTGGCAAAACAGAACCTATGACCGACTCAAACTACACCTTCCCAAAGAGTTTTGTGAACTTCCCTTGATGGGTTTCCCTCACGGTTTCCCAAAGTACCCCACTAAGTACCAGTTCATCTCTTACATGGAGTCCTATGCATCACACTTCTCTATCCACCCAAGGTTCAACCAAACAGTTCAGAGTGCTGAGTTTGACCCAAGTTCTGAATTTTGGGTGGTTAGAACTCAAGATTTTGAGTACATTTCACCATGGCTTGTGGTTGCCACAGGTGAGAATGCTGAGCCTGTGATTCCAAGAATTCCTGGGATGGAGTTGTTTCGTGGTCCCATTGTTCACACCAGTCTCTACAAGTCAGGTTCTGAATACAAAAACCAAAAGGTTTTGGTGATTGGTTGTGGCAATTCTGGAATGGAAGTTAGCTTAGACCTTTGTAGGTACAATGCCATCCCACACATGGTTGCAAGAAATACAGTACATGTTCTTCCTAGGGAGATGTTTGGCTTCTCAACATTTGGAATAGCTATGGCACTATGTAAATGGCTTCCATTAAAGTTAGTAGACAACTTCCTCTTACTGGTGGCTAGCTTCATTTTGGGTAACACCAATCACTATGGTATCAAGAGGCCTAAAACTGGGCCAATAGAACTCAAACTTGCAACTGGGAAAACCCCTGTCCTTGATGTTGGTCAAGTAGCACAAATAAAATCTGGGAACATAAAGGTGGTGATGGAAGGTGTGAAGGAGATAACAAGAAGTGGTGCCAAATTTTTGGATGGACAAGAAAGGGAATTTGAAGCTATAATCTTGGCAACAGGGTACAAGAGCAATGTGCCTACTTGGCTCAAGAGCTGTGATTTTTTCACCAAAGATGGAATGCCCAAGACACCCTTTCCTCATGGTTGGAAAGGAGAGCATGGATTGTATACGGTAGGCTTCACAAGAAGAGGTCTTCATGGAACTTCCTCTGATGCCGTCAAGATTGCTGAAGACATAGCTGGGAAATGGAAAACAGTTAAGGACAAGAGTTATTGTGATTCACATATCATCCTACTCAATAATTCATAG	1230	0.4309	MGSCKEQEKEQAKCVWVHGPIIVGAGPSGIAVAACLSEHGVPSVILERSDCIASLWQNRTYDRLKLHLPKEFCELPLMGFPHGFPKYPTKYQFISYMESYASHFSIHPRFNQTVQSAEFDPSSEFWVVRTQDFEYISPWLVVATGENAEPVIPRIPGMELFRGPIVHTSLYKSGSEYKNQKVLVIGCGNSGMEVSLDLCRYNAIPHMVARNTVHVLPREMFGFSTFGIAMALCKWLPLKLVDNFLLLVASFILGNTNHYGIKRPKTGPIELKLATGKTPVLDVGQVAQIKSGNIKVVMEGVKEITRSGAKFLDGQEREFEAIILATGYKSNVPTWLKSCDFFTKDGMPKTPFPHGWKGEHGLYTVGFTRRGLHGTSSDAVKIAEDIAGKWKTVKDKSYCDSHIILLNNS*	410

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops9g01868	409	SUPERFAMILY	FAD/NAD(P)-binding domain	21	203	IPR036188	-
	Rops9g01868	409	PRINTS	FAD-dependent pyridine nucleotide reductase signature	20	39	-	-
	Rops9g01868	409	PRINTS	FAD-dependent pyridine nucleotide reductase signature	181	199	-	-
	Rops9g01868	409	Gene3D	-	19	392	IPR036188	-
	Rops9g01868	409	PANTHER	FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)	17	391	-	-
	Rops9g01868	409	Pfam	Pyridine nucleotide-disulphide oxidoreductase	21	212	-	-
	Rops9g01868	409	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	19	41	-	-
	Rops9g01868	409	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	177	201	-	-
	Rops9g01868	409	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	138	146	-	-
	Rops9g01868	409	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	35	-	-
	Rops9g01868	409	FunFam	Flavin-containing monooxygenase	20	395	-	-
	Rops9g01868	409	SUPERFAMILY	FAD/NAD(P)-binding domain	150	328	IPR036188	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops9g01868	Rops-Chr9	33807745	33809874	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops9g01868	K11816		-	gmx:100798781	698.738