Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01825 ATGGCAACGGTTTCGAAGATATCATCACTGTTATTCTCATTATCACCCAAACCTAAACTCATTCTTCGAGACACCAATTATTTTCTGCTTTCTGGCAGGGCCATTAGCAGCAGCAGCATCACAAGTAAGAAGCAGAAGGCAAAAGCAGCGTTGGCGAAGGAGAAGAGAAGGACTCGTTCTGACAAGGAATTCGATAAGGACGCAATAATTGAGCATTACAACTCCTCTTCCTCTCATCATGTTCCTGTGATGCTGGCTGAAGTGTTGGATGTCTTCTCAAATTCTTCCTTGACTTCCTTCGTAGATTGCACCCTTGGTGCCGCAGGACACTCCACCGCTGTGATTAGGGGTCATCCGGAGTTGAAGTACTTTGTTGGGATGGATGTGGATCCAGTGGCACTTGACATGGCTCAGACACGCCTCAATGCCGTTTTGGAATCGTCAAGTGTGAGAGTGTTTGCGGTGTTGAAGAATTTTAGACACATCAAGTCTGTGCTTAGAGAACACTTAGGGGGGAATGCTACCGGTGTCGATGGAATCTTAATGGATTTGGGAATGTCATCTATGCAGGTGGATGATCCTCAGAGAGGATTCAGTGTTCTTGGTGATGGACCCCTTGACATGCGTATGGATCCTCAGGCAAGCCTTAGAGCAGAAGACATATTAAATTCTTGGCCAGATTCTGAAGTGGGCCGTATCCTAAGGGAGTACGGGGAAGAAAGTAACTGGCGTACTCTGCAAAAGAAAATTGTCCAAGCCCGATTGCATGGTGGATTGCATTCCACTAGTGACTTGCTGGATCTTATTCGTCGTGTGACTCCTTCAATGAAAGGTGGGAGGCAAGGTTGGATAAAGACAGCATCACGCGCGTTTCAAGCTCTGAGAATCGCGGTTAATGATGAACTGAAGACTCTTGAGGATTCCCTCTATTCTTGTTTTGACTGCCTCGCACCTGGGGGTAGGCTTGCTGTCATATCTTTTCACAGTCTGGAGGACAGAATTGTGAAGCAGACATTTCTTGATATCATTAAAGGGAGGGAAGACATGGGGGTAGAAGGGGAGAGCTGCAATGGTGATCTGAGGAACATGAGTGATGGAATTGAAGAAAAAGAAGCATGGATTAGACAAGTGATACATGGATCAAATGGAACAATTCTCACAAAAAGACCAATAACGCCATCAGAAGATGAAGAGAAATTGAACCGCCGAAGTAGAAGTGCAAAGCTCAGGGTTATTCAGAAGCTTTGA 1248 0.4567 MATVSKISSLLFSLSPKPKLILRDTNYFLLSGRAISSSSITSKKQKAKAALAKEKRRTRSDKEFDKDAIIEHYNSSSSHHVPVMLAEVLDVFSNSSLTSFVDCTLGAAGHSTAVIRGHPELKYFVGMDVDPVALDMAQTRLNAVLESSSVRVFAVLKNFRHIKSVLREHLGGNATGVDGILMDLGMSSMQVDDPQRGFSVLGDGPLDMRMDPQASLRAEDILNSWPDSEVGRILREYGEESNWRTLQKKIVQARLHGGLHSTSDLLDLIRRVTPSMKGGRQGWIKTASRAFQALRIAVNDELKTLEDSLYSCFDCLAPGGRLAVISFHSLEDRIVKQTFLDIIKGREDMGVEGESCNGDLRNMSDGIEEKEAWIRQVIHGSNGTILTKRPITPSEDEEKLNRRSRSAKLRVIQKL* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01825 415 PANTHER S-ADENOSYL-METHYLTRANSFERASE MRAW 75 415 IPR002903 GO:0008168
Rops9g01825 415 NCBIfam 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH 77 414 IPR002903 GO:0008168
Rops9g01825 415 SUPERFAMILY Putative methyltransferase TM0872, insert domain 196 299 IPR023397 GO:0008168
Rops9g01825 415 Gene3D Putative methyltransferase TM0872, insert domain 194 301 IPR023397 GO:0008168
Rops9g01825 415 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 79 415 IPR029063 -
Rops9g01825 415 Hamap Ribosomal RNA small subunit methyltransferase H [rsmH]. 80 415 IPR002903 GO:0008168
Rops9g01825 415 Gene3D Vaccinia Virus protein VP39 80 412 IPR029063 -
Rops9g01825 415 FunFam Ribosomal RNA small subunit methyltransferase H 194 301 - -
Rops9g01825 415 Pfam MraW methylase family 78 414 IPR002903 GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01825 K03438 - gmx:100803819 588.956