LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops9g01823	ATGGGTGAAGAAAAGAAAGAGAAGAGTGTCACTGTGGAGAAGAATGAGAGGAAGGGGTTGATTTCTCGAATTTGGAATGTCATATTTAGGTCTAATAAAGATGATTTTGAGAAGAGGCTTCAGTATATATCTAAAGAAGAAGCTTCTGTTATGGGTAGAATGAGTAAGAGATCCCGTTCTTGGAGGCGAACTTCTAGGCAGCTTATTATATTCTCTGTTATATTTGAGGTCATTGCTGTGGTTTTTGCTATTATGTCGACAAAATCCGTGGATTTGAATTGGAAAATGAGGGCAATTCGGGTTTTGCCGATGTTTCTTTTGCCTGCCTTGTCATCTGCTGCATATTCCATATTTGTCAGCTTCATAAGGATGTGTGATCGCAGGGACCAGAAAATTCTTGAAAGGCTGAGAGCTGAAAGGCAGGCAAAAATTGATGAGCTCAAAGAGAAGACAAATTATTACATTACTCAACAACTCATTCAGAGATATGACACAGACCCAGCAGCAAAGGCAGCTGCTGCAACTGTTTTGGCATCCAAGTTGGGTGCAGATTCGGGTATGAAAGTGTATGTGGGAGATGAATCTATGTCTGGTGCTCCAACAGGGAAGACCAACAACGTTGAACCTGTGCAGTCCAGTGGTCTTCGAAATCGCAAACAAGTGCACTCTAAATCCACTAGTCCAGGGACTACTACCCCAAATAATCCTGATCAACAATTAGCTGGTTCTGCAGGAATTGATCAAACTCAGACTTCCATGCATAATCAGCTTGTAGTGGTTGAACATCACCAACCTCAAAGTTCAACGCATGATGGTGGTTGGATTGCTCGAATTGCAGCATTGCTTGTCGGTGAGGATCCAACACAGTCTTATGCGCTCATATGTGGTAACTGCCATATGCATAATGGTCTTGCCCAGAAAGAGGATTTCCCATTCATCACTTACTACTGCCCACACTGTCACGCCCTCAACAAACCAAAGCAATCGGATGAGCATGTTTCTGGTCTTAATTCCCCAAACATGGGGTCCCCAAAAACAGATGACGGTGAGGCCCTCAAAAATGCTAGTGCTTGTGTAGCTGACAGCATAATCAAAAGTAATAATCATGTAAAAGCTAGGCCTGAGATTGAGGAAGTATCTGAAAGGATTAGTTTAGGGGGAGAAAGCTAG	1170	0.4274	MGEEKKEKSVTVEKNERKGLISRIWNVIFRSNKDDFEKRLQYISKEEASVMGRMSKRSRSWRRTSRQLIIFSVIFEVIAVVFAIMSTKSVDLNWKMRAIRVLPMFLLPALSSAAYSIFVSFIRMCDRRDQKILERLRAERQAKIDELKEKTNYYITQQLIQRYDTDPAAKAAAATVLASKLGADSGMKVYVGDESMSGAPTGKTNNVEPVQSSGLRNRKQVHSKSTSPGTTTPNNPDQQLAGSAGIDQTQTSMHNQLVVVEHHQPQSSTHDGGWIARIAALLVGEDPTQSYALICGNCHMHNGLAQKEDFPFITYYCPHCHALNKPKQSDEHVSGLNSPNMGSPKTDDGEALKNASACVADSIIKSNNHVKARPEIEEVSERISLGGES*	390

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops9g01823	389	MobiDBLite	consensus disorder prediction	328	350	-	-
	Rops9g01823	389	Coils	Coil	130	153	-	-
	Rops9g01823	389	PANTHER	ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK	15	348	IPR040115	GO:0071786
	Rops9g01823	389	MobiDBLite	consensus disorder prediction	330	344	-	-
	Rops9g01823	389	MobiDBLite	consensus disorder prediction	198	242	-	-
	Rops9g01823	389	Pfam	Predicted integral membrane zinc-ribbon metal-binding protein	274	324	IPR019273	-
	Rops9g01823	389	MobiDBLite	consensus disorder prediction	195	242	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops9g01823	Rops-Chr9	32715547	32721935	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops9g01823	K23292		-	gmx:100815496	564.688