Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01822 ATGGGCAGCGCATTCCACCTTTGTGCCGGTTTCAATTTAACCACTTCCAATCCTGTTCAAGGTACAAAATGCAAGTACGCAGGTCAATCAGTGAGAGCACTTCCTATACGCATATTATCAGTGGGAAAGAAGCGATCACGTGGACTGCAACTCATGGTTGATGAGTACGTTGAAAAGATCAAGTACTATTGCAGTGTTGAGGATGTTCAAATTCGGCCAAATCCCAGAAATGCACGTGACCAAAGGGCTCAGGTTGATGATGAAGACACTGCAGTGATGAACCTTATAAGGTCTGATGATTGGGTTGTGGTGTTGGATGAACGTGGGCAAGACATAGGATCTGAGCAAATGGCAGAGTTGGTGGGTGATGCAGGAAATACTGGTGCTTCACGATTATCTTTCTGTATTGGTGGGCCCTATGGTCTTGGAAGAAAAATAAGGGAACGTGCTAACTTATCAATCAAGTTATCTTCACTTGTCTTAAATCATCAAATAGCATTACTTGTGCTCGTGGAACAGCTTTACAGGTCGTGGACAATTTTAAGAGGACAAAAGTACCATCATTAG 567 0.4321 MGSAFHLCAGFNLTTSNPVQGTKCKYAGQSVRALPIRILSVGKKRSRGLQLMVDEYVEKIKYYCSVEDVQIRPNPRNARDQRAQVDDEDTAVMNLIRSDDWVVVLDERGQDIGSEQMAELVGDAGNTGASRLSFCIGGPYGLGRKIRERANLSIKLSSLVLNHQIALLVLVEQLYRSWTILRGQKYHH* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01822 188 PIRSF MT_bac 34 188 IPR003742 GO:0006364|GO:0008168
Rops9g01822 188 CDD RlmH-like 36 188 IPR003742 GO:0006364|GO:0008168
Rops9g01822 188 Pfam Predicted SPOUT methyltransferase 36 187 IPR003742 GO:0006364|GO:0008168
Rops9g01822 188 Gene3D - 35 188 IPR029026 -
Rops9g01822 188 SFLD SPOUT Methyltransferase 17 188 - -
Rops9g01822 188 PANTHER METHYLTRANSFERASE 15 188 IPR003742 GO:0006364|GO:0008168
Rops9g01822 188 Hamap Ribosomal RNA large subunit methyltransferase H [rlmH]. 34 188 IPR003742 GO:0006364|GO:0008168
Rops9g01822 188 SUPERFAMILY alpha/beta knot 35 186 IPR029028 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01822 K00783 - gmx:100796609 330.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01822 9 32706586 32711507 Rops9g01822 9 32706586 32711507 ECH