Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01580 ATGACAAGAAGAACAACCATAACCCCACAGTTTCAGTTCCACAGTTTATCACTCTTCTACATCACCCTCCTCCTCTCACCCTCCTTCATCTTCACAACACAAGAACAAGAAGACAACCCGATAACCCGTTTCCAACGCTACCTCCGAATCAACACCGCCCACCCTAACCCGGATTACTCCTCCGCCGTCTCCTACCTCAAATCCATAGCAGACTCCATCGGAATCCACCACCAAACCCTAGAATTCTCCCCTGGTAAACCCCTCCTCCTGCTCACGTGGAAAGGCTCCAACCCTTCCCTCCCTTCCATCCTCCTCAACTCTCACCTCGACTCCGTCCCCGCCGAACCCTCCAAATGGCTCCACCCTCCCTTCTCCGCCACACGCGCTTCCAACGGCGCCATCTACGCGCGTGGAGCACAGGACGACAAGTGCATCGCCATGCAGTATCTTGAAGCCATACGCAACCTCAGGAGTCAGGGTTTCCTGCCCACGCGCTCCGTCCACATGTCGCTCGTCCCCGACGAGGAGATCGGAGGGCTCGACGGGGCCGCCAAGTTCGTGGAGTCCGAGGAATTTGAGGGTTTGAATGTTGGGTTTGCGTTGGATGAAGGGCAGGCATCGCCTGGGGATGAGTTTAGGGTTTTCTACGCGGATAGGATTCCGTGGAATTTGAAGATCAAGGCGAAAGGAAGACCAGGGCATGGTTCTGTGATGTATGATAATGGTGCGATGGAGAATTTGATGAAGAGTGTTGAGGTTGTGAATAGGTTTAGGGAGAGTGAGTTTGATGTGGTTAAGGCTGGGAAGGCTATGAATTCCGAGGTTGTTTCGGTTAATTGTGTTTATGTCAAAGCTGGGGTTGCCTCCGAAGATGGGTTTGTGATGAATGTACAACCTTCGGAAGCGGAAGCTGGGTTTGATCTTAGGCTGACCCCTATGACGGACCCTGACGAAATGAGAAGGAGAATTGCTGCAGAATGGGCGCCTGCTGTTAGAAATATGTCATATGAGATCACAACCAAAGGACCCATCAGAGACTACAAGGGGCGCCCAATAATGACCGCAACTAATGATTCCAATCCATGGTGGTTAGTTTTCAAGCAGGCTATCACATCGGCAGGAGGAAAACTTTCAAGGCCTGAAATTCTTGCATCGACAACTGATGCTCGATACCTTAGACAAAAAGGAATTCCTGTCCTGGGTTTCTCCCCAATGAGAAATACTCCTATCTTGCTTCATGATCACAACGAGCACCTACGAGATACTGTGTACTTGAAGGGAATACATGTATACGAATCTCTGATAAGTTCCTTGAGTTCATTTACAGAAGCTTCACATTAA 1341 0.5019 MTRRTTITPQFQFHSLSLFYITLLLSPSFIFTTQEQEDNPITRFQRYLRINTAHPNPDYSSAVSYLKSIADSIGIHHQTLEFSPGKPLLLLTWKGSNPSLPSILLNSHLDSVPAEPSKWLHPPFSATRASNGAIYARGAQDDKCIAMQYLEAIRNLRSQGFLPTRSVHMSLVPDEEIGGLDGAAKFVESEEFEGLNVGFALDEGQASPGDEFRVFYADRIPWNLKIKAKGRPGHGSVMYDNGAMENLMKSVEVVNRFRESEFDVVKAGKAMNSEVVSVNCVYVKAGVASEDGFVMNVQPSEAEAGFDLRLTPMTDPDEMRRRIAAEWAPAVRNMSYEITTKGPIRDYKGRPIMTATNDSNPWWLVFKQAITSAGGKLSRPEILASTTDARYLRQKGIPVLGFSPMRNTPILLHDHNEHLRDTVYLKGIHVYESLISSLSSFTEASH* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01580 446 PIRSF ACY-1 30 443 - -
Rops9g01580 446 Pfam Peptidase family M20/M25/M40 104 436 IPR002933 GO:0016787
Rops9g01580 446 Gene3D - 224 335 - -
Rops9g01580 446 NCBIfam N-acyl-aliphatic-L-amino acid amidohydrolase 34 441 IPR010159 GO:0004046|GO:0005737|GO:0006520
Rops9g01580 446 FunFam Aminoacylase 1 32 223 - -
Rops9g01580 446 FunFam Aminoacylase-1, putative 360 441 - -
Rops9g01580 446 FunFam aminoacylase-1 isoform X1 223 334 - -
Rops9g01580 446 PANTHER AMINOACYLASE-1 32 443 - -
Rops9g01580 446 Pfam Peptidase dimerisation domain 223 325 IPR011650 -
Rops9g01580 446 SUPERFAMILY Zn-dependent exopeptidases 34 439 - -
Rops9g01580 446 Gene3D - 360 441 - -
Rops9g01580 446 Gene3D Zn peptidases 30 223 - -
Rops9g01580 446 SUPERFAMILY Bacterial exopeptidase dimerisation domain 223 337 IPR036264 -
Rops9g01580 446 CDD M20_AcylaseI_like 37 439 - -
Rops9g01580 446 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 139 178 IPR001261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01580 Rops-Chr9 27519172 27525279 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01580 K14677 - gmx:100817383 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01580 9 27519172 27525279 Rops9g01580 9 27519172 27525279 ECH