Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01567 ATGGCATTGCATCTTCAAATGATTTTACCAATCTCTTTGATTCTAGCGATCATTTTATCAGGGCAAAGAACATGCGAGTCAGCCAGAGTGTTCACCATATCAAACTATTGCAAGGAGACACTATGGCCAGCAGTGACACCAGGTGACAACTTCAACGGTGGAGGATTTGTTCTAAAACCAGGCCAATCACAAGTGTTCACAGCCCCAGTTAGTTGGAGTGGTCGAATTTGGGCTCGAACAGGTTGCAAATTTGACCAAAACGGTAATGGTCAATGCCAAACAGGTTCATGTGGTACCACTTTGAAATGTTCTGGCTCAGGTAAAACCCCTGCATCACTAGCAGAATTCACACTAGCACAACCGGATTTCTATGATGTTAGCCTCGTTGATGGTTTCAACGTGCCGATTTCTGTTAAGCCTATAAATGGAAAGGGAAATTGCTCCACTGCTGGATGTGACTCTGATCTTAGATCTGATTGTCCTAAAGAACTTTCCGTTAAAAGTAACGGTAAGACCGTTGGGTGTAGAAGTGCTTGTGATGTGTTTAATGCTGATGAGTATTGCTGTAGAGGGGTTTATGGGAACCCAGTTACTTGTAAACCAACGTTTTATTCCAAGAAGTTTAAGGAGGCTTGCCCAACTGCTTATAGTTATGCTTATGATGATCCAACTAGTATTTTCACTTGCTCAGGGACAGATTATGTTGTAGCCTTCTGCGCTTCCAGGAAACGACAGGTATGCACTTACCATGATAACAAGCTTCACTGCAGTGGATCACAAGGCTTAAAGTCATTGACTGGAAGCTGGTGGCTGATCGTAATGGTAACGGTGTTTTCGATGCTTAGTTTGAAGATTGGATTCTAG 864 0.4294 MALHLQMILPISLILAIILSGQRTCESARVFTISNYCKETLWPAVTPGDNFNGGGFVLKPGQSQVFTAPVSWSGRIWARTGCKFDQNGNGQCQTGSCGTTLKCSGSGKTPASLAEFTLAQPDFYDVSLVDGFNVPISVKPINGKGNCSTAGCDSDLRSDCPKELSVKSNGKTVGCRSACDVFNADEYCCRGVYGNPVTCKPTFYSKKFKEACPTAYSYAYDDPTSIFTCSGTDYVVAFCASRKRQVCTYHDNKLHCSGSQGLKSLTGSWWLIVMVTVFSMLSLKIGF* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01567 287 SMART tha2 31 240 IPR001938 -
Rops9g01567 287 ProSiteProfiles Thaumatin family profile. 28 239 IPR001938 -
Rops9g01567 287 PIRSF PR5 1 284 IPR001938 -
Rops9g01567 287 PANTHER OS03G0233200 PROTEIN 21 239 IPR001938 -
Rops9g01567 287 Gene3D Thaumatin 30 239 IPR037176 -
Rops9g01567 287 CDD TLP-PA 30 239 - -
Rops9g01567 287 FunFam Thaumatin-like protein 1a 29 240 - -
Rops9g01567 287 SUPERFAMILY Osmotin, thaumatin-like protein 30 240 IPR037176 -
Rops9g01567 287 PRINTS Pathogenesis-related protein signature 30 42 IPR001938 -
Rops9g01567 287 PRINTS Pathogenesis-related protein signature 54 63 IPR001938 -
Rops9g01567 287 PRINTS Pathogenesis-related protein signature 122 138 IPR001938 -
Rops9g01567 287 PRINTS Pathogenesis-related protein signature 230 239 IPR001938 -
Rops9g01567 287 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Rops9g01567 287 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Rops9g01567 287 Pfam Thaumatin family 35 239 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01567 Rops-Chr9 27139522 27141900 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01567 28 283 Receptor kinase-like Gene Family AT5G38280 41.111 8.25e-55 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01567 - - gmx:100813659 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01567 9 27139522 27141900 Rops9g01567 9 27139522 27141900 ECH